Updating the sort key is not commutative and MUST be serialised. The
correctness of the current catalog interface relies on the caller
serialising updates globally, something it cannot reasonably assert in a
distributed system.
This change of the catalog interface pushes this responsibility to the
catalog itself where it can be effectively enforced, and allows a caller
to detect parallel updates to the sort key.
* refactor: DF-driven on-demand mem limit instead of ahead-of-time heuristics
Closes#6310.
* refactor: rename and tune default exec mem limits
* fix: ingester2 bits after rebase
* feat: create namespace API call in router
Co-authored-by: Nga Tran <nga-tran@live.com>
* chore: treat retention as ns except in CLI
* fix: overflow in nanosecond calc
* fix: retention test after changing it from hours to ns
* chore: comment clarification in cli; better response type for error in ns API
* fix: correct some rebase mistakes
* chore: merge namespace create & create_with_retention; renamed ns create test helper fn & const
* fix: ns autocreation test was wrong after rebase
* fix: mem catalog has default 1hr retention, accidently removed in rebase
* chore: remove mem catalogs default 1hr retention; make it settable in sets & router
Co-authored-by: Luke Bond <luke.n.bond@gmail.com>
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
* feat: reject writes that are outside the retention period
* feat: add retention validator into handler stack
* chore: Apply suggestions from code review
Co-authored-by: Dom <dom@itsallbroken.com>
* refactor: address review comments
* test: unit tests fot retention validation
* chore: address review comments
* test: more unit tests and integration tests
* refactor: make time inside retention period for emphemeral_mode test
* fix: 2 hours
Co-authored-by: Dom <dom@itsallbroken.com>
* test: test coverage for sorting and merging in compactor
* fix: Apply suggestions from code review (comments)
Co-authored-by: Marco Neumann <marco@crepererum.net>
* feat: use itertools to cover all permutations
Co-authored-by: Marco Neumann <marco@crepererum.net>
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
* refactor: simplify `QueryChunk` data access
We have only two types for chunks (now that the RUB is gone):
1. In-memory RecordBatches
2. Parquet files
Loads of logic is duplicated in the different `read_filter`
implementations. Also `read_filter` hides a solid amount of logic from
DataFusion, which will prevent certain (future) optimizations. To enable #5897
and to simplify the interface, let the chunks return the data (batches
or metadata for parquet files) directly and let `iox_query` perform the
actual heavy-lifting.
* docs: improve
Co-authored-by: Andrew Lamb <alamb@influxdata.com>
* docs: improve
Co-authored-by: Andrew Lamb <alamb@influxdata.com>
Co-authored-by: Andrew Lamb <alamb@influxdata.com>
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
Use the proper top-level DataFusion context and register the object
store there.
Note that we still hide the `ParquetExec` behind an opaque record batch
stream. Fixing that is next on my list.
Helps with #5897.
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
Use a proper typed stream instead of peeking the first element. This is
more in line with our remaining stack and shall also improve error
handling.
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
* fix: Avoid some allocations by collecting instead of inserting into a vec
* refactor: Encode that adding columns is for one table at a time
* test: Add another test of column limits
* test: Add below/above limit tests for create_or_get_many
* fix: Explicitly DO NOT check column limits when inserting many columns
* feat: Cache the max_columns_per_table on the NamespaceSchema
* feat: Add a function to validate column limits in-memory
* fix: Provide more useful information when over column limits
* fix: Swap types to remove intermediate allocation
* docs: Explain the interactions of the cache and the column limits
* test: Actually set up test that showcases column limit race condition
* fix: Allow writing to existing columns even if table is over column limit
Co-authored-by: Dom <dom@itsallbroken.com>
* refactor: do not override parquet file size in querier
This is going to be an issue when we actually rely on the size for
reading, see #5531.
* refactor: use selected file size mocking in compactor
Do not blindly override parquet file sizes for all subsystems.
This is going to be an issue when we actually rely on the size for
reading, see #5531.
* refactor: remove ability to override file sizes in catalog
Blindly overriding data for all subsystems is dangerous, because some
parts of our stack actually rely on the actual file size. See #5531.
* docs: explain `size_overrides`
And only allow setting this when no record batch or line protocol is
specified so that there isn't a way to create a parquet file with data
that has a mismatched row count.
* refactor: remove min_sequnce_number
* fix: typos
* fix: remove min_sequencer_number from new files from merging main
* fix: add back throwing error if the compactor compacts files persisted by the ingester after the ingester sends max seq_num back to querier
* test: add test_compactor_collision back but modify the input to make it work woth new changes
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
* feat: initial implementation for selecting compaction candidates
* feat: 2 catalog functions to choose the most thorughput partitions to compact and the selecting candidate function itself
* test: tests for the new 2 queries
* feat: more tests and metrics for chooing compaction candidates
* chore: Apply self suggestions from self review
* chore: cleanup
* chore: fix doc comment
* chore: Apply suggestions from code review
Co-authored-by: Carol (Nichols || Goulding) <193874+carols10cents@users.noreply.github.com>
* refactor: address review comments
* fix: get the right time provider for the tests
* refactor: remove the left over compaction_
* fix: typos
* fix: make the param name and env name consistent
* refactor: make relevant iSomething to uSomething
* fix: typo
Co-authored-by: Carol (Nichols || Goulding) <193874+carols10cents@users.noreply.github.com>
Fixes#5118.
Given a partition ID, look up the non-deleted Parquet files for that
partition. Separate them into level 0 and level 1, and sort the level 0
files by max sequence number.
This is not called anywhere yet.
`Executor` is only used as a performance boundary, not as a correctness
or data boundary so let's try to re-use it. This also simplifies
profiling of tests since we don't end up with hundreds (or even
thousands) of threads.
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
* refactor: change level 1 to level 2 preparing for next design changes
* fix: make level-2 consistent everywhere
* chore: remove unused comments
* refactor: change all the name level_1 to level_2 to completely replace 1 with 2 to amke everything consistent
* chore: add correspinding constants for the comapction levels in the comments
Co-authored-by: Dom <dom@itsallbroken.com>
* refactor: remove `DecodedParquetFile` from `iox_tests`
* refactor: remove `DecodedParquetFile` from querier
Also pull out all the chunk schema and sort key handling into a function
so that RB chunks and parquet chunks mostly use the same code path.
* refactor: remove `DecodedParquetFile`
* refactor: remove `ParquetFileWithMetadata` usage
* fix: test data consistency
* feat: split times of compacting results based on the max file size
* feat: cosider max file size while computing split time
* test: tests for comput_split_time
* feat: first step to teach the function split_the_steam to know how to split data into n streams using n-1 input PhysicalExprs
* feat: make StreamSplitNode support a list of expression
* docs: explain how StreamSplitNode works
* feat: Teach compute_split_time to split a time range into many contiguous ranges and split compacted result into multiple non-overlapped files based on the config comapction_max_size_bytes
* chore: cleanup
* chore: clean up doc
* chore: address review comments
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
* fix: use proper sort key in tests
* feat: do not rely on encoded parquet metadata for RB chunks
Ref #4124.
* refactor: allocate less strings
* refactor: use upstream PK calculation
* fix: cache expiration w/o a good reason
* refactor: make namespace cache safer to use
* refactor: make partition cache safer to use
* refactor: `TestPartition::update_sort_key` should return an `Arc`
The whole test framework is built around `Arc`s, so let's fix this
consistency issue.
* fix: actually calculate correct column set in test framework
* feat: check expected parquet file schema
While working on the querier I made some mistakes regarding schemas and
such a check would have greatly improved the debugging experience.
* feat: namespace cache expiration
* fix: improve parquet schema check
* fix: remove clone
* refactor: store per-file column set in catalog
Together with the table-wide schema and the partition-wide sort key, this should
be everything we need to read a parquet file directly into memory
without peeking any file-level metadata.
The querier will use this to directly load parquet files into the read
buffer.
**WARNING: This requires a catalog wipe!**
Ref #4124.
* refactor: use proper `ColumnSet` type
This commit changes the code base to use a new reference-counted
PartitionKey type wrapper, instead of passing a bare String around.
This allows the compiler to type check & verify usage of the partition
key, instead of passing a bare string around. By reference counting the
underlying string, we reduce memory usage for some use cases.
* feat: Change data type of catalog Postgres partition's sort_key from a string to an array of string
* test: add column with comma
* fix: use new protonuf field to avoid incompactible
* fix: ensure sort_key is an empty array rather than NULL
* refactor: address review comments
* refactor: address more comments
* chore: clearer comments
* chore: Update iox_catalog/migrations/20220607102200_change_sort_key_type_to_array.sql
* chore: Update iox_catalog/migrations/20220607102200_change_sort_key_type_to_array.sql
* fix: Rename migration so it will be applied after
Co-authored-by: Marko Mikulicic <mkm@influxdata.com>
Dom Dwyer
Luke Bond
Marco Neumann
Nga Tran
Andrew Lamb
dependabot[bot]
Carol (Nichols || Goulding)
Jake Goulding
Andrew Lamb
Carol (Nichols || Goulding)
YIXIAO SHI