Commit Graph

414 Commits (2c771ea9f212a7482836259768c46d4780e8ae7a)

Author SHA1 Message Date
Nga Tran 77cbc880f6
feat: Add cap limit on number of partitions to be compacted in parallel (#6305)
* feat: Add cap limit on number of partitions to be comapcted in parallel

* chore: cleanup

* chore: clearer comments
2022-12-01 21:23:44 +00:00
Andrew Lamb 255a168d07
refactor: Refactor ParquetFileCombining into a builder and plan, and add sort exec test (#6196)
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-11-22 14:47:47 +00:00
dependabot[bot] 04c00bbb62
chore(deps): Bump bytes from 1.2.1 to 1.3.0 (#6199)
Bumps [bytes](https://github.com/tokio-rs/bytes) from 1.2.1 to 1.3.0.
- [Release notes](https://github.com/tokio-rs/bytes/releases)
- [Changelog](https://github.com/tokio-rs/bytes/blob/master/CHANGELOG.md)
- [Commits](https://github.com/tokio-rs/bytes/commits)

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  dependency-type: direct:production
  update-type: version-update:semver-minor
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2022-11-22 08:23:24 +00:00
dependabot[bot] a9db7581cd
chore(deps): Bump tokio from 1.21.2 to 1.22.0 (#6183)
Bumps [tokio](https://github.com/tokio-rs/tokio) from 1.21.2 to 1.22.0.
- [Release notes](https://github.com/tokio-rs/tokio/releases)
- [Commits](https://github.com/tokio-rs/tokio/compare/tokio-1.21.2...tokio-1.22.0)

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  update-type: version-update:semver-minor
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2022-11-21 10:21:24 +00:00
Luke Bond 7c813c170a
feat: reintroduce compactor first file in partition exception (#6176)
* feat: compactor ignores max file count for first file

chore: typo in comment in compactor

* feat: restore special first file in partition compaction logic; add limit

* fix: calculation in compaction max file count

chore: clippy

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-11-18 15:58:59 +00:00
Nga Tran 49a9565240
feat: gRPC that creates namespace (#6103)
* feat: create namespace API call in router

Co-authored-by: Nga Tran <nga-tran@live.com>

* chore: treat retention as ns except in CLI

* fix: overflow in nanosecond calc

* fix: retention test after changing it from hours to ns

* chore: comment clarification in cli; better response type for error in ns API

* fix: correct some rebase mistakes

* chore: merge namespace create & create_with_retention; renamed ns create test helper fn & const

* fix: ns autocreation test was wrong after rebase

* fix: mem catalog has default 1hr retention, accidently removed in rebase

* chore: remove mem catalogs default 1hr retention; make it settable in sets & router

Co-authored-by: Luke Bond <luke.n.bond@gmail.com>
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-11-18 13:02:12 +00:00
Nga Tran 80e91a644b
chore: Revert "feat: compactor ignores max file count for first file (#6144)" (#6158)
This reverts commit bf1681f4fe.
2022-11-16 19:58:46 +00:00
Luke Bond bf1681f4fe
feat: compactor ignores max file count for first file (#6144)
* feat: compactor ignores max file count for first file

* chore: typo in comment in compactor
2022-11-16 11:21:28 +00:00
Andrew Lamb 448911794c
test: test coverage for sorting and merging in compactor (#6136)
* test: test coverage for sorting and merging in compactor

* fix: Apply suggestions from code review (comments)

Co-authored-by: Marco Neumann <marco@crepererum.net>

* feat: use itertools to cover all permutations

Co-authored-by: Marco Neumann <marco@crepererum.net>
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-11-15 20:39:45 +00:00
Nga Tran 9c4266c503
refactor: first step to remove unused retention_duration (#6113)
* refactor: first step to remove unused retention_duration

* refactor: remove retenion_duration from update catalog

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-11-11 15:21:06 +00:00
Luke Bond f9316decee
chore: expose compactor's hot compaction hours thresholds as cfg (#6060)
* chore: expose compactor's hot compaction hours thresholds as cfg

* fix: add missing compactor arg envar; fix some comments

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-11-07 15:29:17 +00:00
Marco Neumann f511db380c
refactor: remove table name from chunks (#6063)
It should be always clear from the context to which table a chunk
belongs.

I think having a table name bound to a chunk goes back to a time where
chunks had multiple tables.

Helps with #6049.

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-11-07 10:42:57 +00:00
Nga Tran 654ed98d1f
feat: config param to set when partition is cold (#6044)
* feat: config param to set when partition is cold

* chore: Apply suggestions from code review

Co-authored-by: Andrew Lamb <alamb@influxdata.com>

* fix: make default 8 hours and avoid using 8 * 60 becasue it is a string, not expression which makes a test fail

Co-authored-by: Andrew Lamb <alamb@influxdata.com>
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-11-03 15:03:56 +00:00
Andrew Lamb 4fb2843d05
refactor: Rename `schema::selection::Selection` to `schema::projection::Projection` (#6037)
* chore: Rename `schema::selection::Selection` to `schema::projection::Projection`

* fix: docs

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-11-02 18:15:04 +00:00
Marco Neumann 45b3984aa3
refactor: simplify `QueryChunk` data access (#6015)
* refactor: simplify `QueryChunk` data access

We have only two types for chunks (now that the RUB is gone):

1. In-memory RecordBatches
2. Parquet files

Loads of logic is duplicated in the different `read_filter`
implementations. Also `read_filter` hides a solid amount of logic from
DataFusion, which will prevent certain (future) optimizations. To enable #5897
and to simplify the interface, let the chunks return the data (batches
or metadata for parquet files) directly and let `iox_query` perform the
actual heavy-lifting.

* docs: improve

Co-authored-by: Andrew Lamb <alamb@influxdata.com>

* docs: improve

Co-authored-by: Andrew Lamb <alamb@influxdata.com>

Co-authored-by: Andrew Lamb <alamb@influxdata.com>
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-11-02 08:18:33 +00:00
Marco Neumann 072439e428
refactor: mandatory `QueryChunkMeta::summary` (#5997)
With #5963 merged, all chunks now provide a summary (even though it may
not contain data for all columns). So let's make it mandatory, which
also removes a few 🙈-style `.except(...)` calls.

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-10-31 16:38:02 +00:00
Carol (Nichols || Goulding) dad1ad1318
feat: Add the catalog service to ingester, querier, and compactor
So that `remote get` that uses the catalog service can work no matter
what kind of server you contact.
2022-10-28 10:49:26 -04:00
Carol (Nichols || Goulding) 53445af25d
chore: Alphabetize some dependencies
I can't handle not knowing where to look for a dependency or knowing
where to add a new dependency.
2022-10-28 10:34:25 -04:00
Marco Neumann 8447d46093
refactor: remove `QueryChunkMeta::timestamp_min_max` (#5963)
Use the table summary instead. This allows us to have a single mechanism
that both IOx and DataFusion understand. This basically lifts the "basic
table summary" mechanism that the querier uses to `iox_query` and let
the compactor and ingester use the same mechanism.

While not strictly necessary, simplifying the `QueryChunk[Meta]`
interface helps with #5897.

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-10-28 10:29:16 +00:00
Carol (Nichols || Goulding) 3145e2c05b
feat: Use workspace dep inheritance for the arrow crate 2022-10-26 10:34:29 -04:00
Carol (Nichols || Goulding) 44936f661a
feat: Use workspace dep inheritance for datafusion instead of shim crate 2022-10-26 10:33:56 -04:00
Carol (Nichols || Goulding) 2e83e04eab
feat: Use workspace package metadata to reduce differences and repetition 2022-10-24 13:04:09 -04:00
Nga Tran 84e5c2a0ee
fix: cardinality of each batch should use row count of the batch (#5946)
* fix: cardinality of each batch should use row count of the batch

* chore: cleanup

* fix: auto-merge conflict

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-10-24 15:36:33 +00:00
Marco Neumann e0062f2d40
refactor: do NOT use fake DF context for parquet reading (#5942)
Use the proper top-level DataFusion context and register the object
store there.

Note that we still hide the `ParquetExec` behind an opaque record batch
stream. Fixing that is next on my list.

Helps with #5897.

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-10-24 08:20:26 +00:00
Jake Goulding fa7fe2e9cf feat: Add a gRPC endpoint to delete a skipped compaction
Also add a CLI usage of it for convenience
2022-10-21 15:12:20 -04:00
Carol (Nichols || Goulding) 0132a33946
fix: Rename SkippedCompactionService to CompactionService
To make a good place for other compactor-related gRPC actions in the
future.
2022-10-21 13:40:37 -04:00
Carol (Nichols || Goulding) 699332fd6b
fix: Actually implement the error conversion, oops 2022-10-21 13:40:31 -04:00
Carol (Nichols || Goulding) ba25300b01
feat: Create compactor service to list skipped compactions 2022-10-21 13:40:31 -04:00
Marco Neumann eb5a661ab3
refactor: prep work for #5897 (#5907)
* refactor: add ID to `ParquetStorage`

* refactor: remove duplicate code

* refactor: use dedicated `StorageId`
2022-10-19 11:54:42 +00:00
dependabot[bot] b5574c07b7
chore(deps): Bump async-trait from 0.1.57 to 0.1.58 (#5904)
Bumps [async-trait](https://github.com/dtolnay/async-trait) from 0.1.57 to 0.1.58.
- [Release notes](https://github.com/dtolnay/async-trait/releases)
- [Commits](https://github.com/dtolnay/async-trait/compare/0.1.57...0.1.58)

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  dependency-type: direct:production
  update-type: version-update:semver-patch
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2022-10-19 09:40:26 +00:00
Andrew Lamb d706f8221d
chore: Update datafusion and arrow / parquet / arrow-flight 25.0.0 (#5900)
* chore: Update datafusion and  `arrow` / `parquet` / `arrow-flight` 25.0.0

* chore: Update for structure changes

* chore: Update for new projection pushdown

* chore: Run cargo hakari tasks

* fix: fmt

Co-authored-by: CircleCI[bot] <circleci@influxdata.com>
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-10-18 20:58:47 +00:00
kodiakhq[bot] e6fd0bc621
Merge branch 'main' into cn/l2-file-size 2022-10-14 15:26:13 +00:00
Carol (Nichols || Goulding) 475db15a51
fix: Compact one L1 file even if it is over the file size limit 2022-10-14 10:55:34 -04:00
Andrew Lamb 8021b8be0b
fix: Use Display rather than Debug when logging errors (#5859)
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-10-14 14:43:11 +00:00
Carol (Nichols || Goulding) b2df492558
feat: Limit L1 -> L2 compaction based on file size 2022-10-13 16:20:22 -04:00
Andrew Lamb 9134ccd6c3
chore: Update datafusion again (#5855)
* chore: Update datafusion

* chore: Updates for changes in datafusion

* chore: more updates

* fix: update doc example

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-10-13 19:18:57 +00:00
Carol (Nichols || Goulding) 082d045633
fix: Update test compactor limit values 2022-10-13 14:25:10 -04:00
Carol (Nichols || Goulding) cdd01eb3fc
test: Verify L1 files chosen for compaction are limited by the memory budget 2022-10-13 14:15:39 -04:00
Carol (Nichols || Goulding) 3cdf2556ec
test: Verify L1 files in a group by themselves get upgraded to L2 2022-10-13 14:15:39 -04:00
Nga Tran fab3cd845c
feat: add memory need for output streams into our estimation (#5847)
* feat: add memory need for output streams into our estimation

* test: modify tests to have better coverage

* refactor: use constants isntead of numbers

* chore: address review comments

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-10-13 14:31:19 +00:00
Nga Tran 1400bf99e4
refactor: split memory estimation into bytes to store and bytes to stream (#5845)
* refactor: split memory estimation into bytes to store and bytes to stream

* chore: cleanup

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-10-12 16:59:51 +00:00
Andrew Lamb d57c99638c
chore: Update datafusion + `arrow`, `arrow-flight`, and `parquet` to 24.0.0.0 (#5792)
* chore: Update datafusion + `arrow`, `arrow-flight`, and `parquet` to 24.0.0.0

* fix: Update for coercion, fix explain plans for change in column name display

* chore: Update datafusion lock

* fix: Update for other API changes

* chore: Update to latest datafusion pin

* chore: Run cargo hakari tasks

Co-authored-by: CircleCI[bot] <circleci@influxdata.com>
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-10-12 16:19:14 +00:00
Nga Tran f05ca867a5
feat: add file size into estimated memory (#5837)
* feat: add file size into estimataed memory

* chore: cleanup

* chore: fmt

* chore: Apply suggestions from code review

Co-authored-by: Andrew Lamb <alamb@influxdata.com>

* chore: run fmt after applying review suggestion

* fix: fix tests towork with the change for review suggestion

Co-authored-by: Andrew Lamb <alamb@influxdata.com>
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-10-12 14:42:53 +00:00
Nga Tran b7153862b0
refactor: due to limit in size uplaoed to S3, we need to split output file of cold compaction, too (#5834)
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-10-11 17:22:19 +00:00
dependabot[bot] 933493fab3
chore(deps): Bump object_store from 0.5.0 to 0.5.1
Bumps [object_store](https://github.com/apache/arrow-rs) from 0.5.0 to 0.5.1.
- [Release notes](https://github.com/apache/arrow-rs/releases)
- [Changelog](https://github.com/apache/arrow-rs/blob/master/CHANGELOG-old.md)
- [Commits](https://github.com/apache/arrow-rs/compare/object_store_0.5.0...object_store_0.5.1)

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  update-type: version-update:semver-patch
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2022-10-11 01:19:10 +00:00
Marco Neumann c4c83e0840
fix: query error propagation (#5801)
- treat OOM protection as "resource exhausted"
- use `DataFusionError` in more places instead of opaque `Box<dyn Error>`
- improve conversion from/into `DataFusionError` to preserve more
  semantics

Overall, this improves our error handling. DF can now return errors like
"resource exhausted" and gRPC should now automatically generate a
sensible status code for it.

Fixes #5799.
2022-10-06 08:54:01 +00:00
Nga Tran 2f08a64f16
feat: not split output files in the first step of cold compaction (#5781)
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-09-30 16:08:03 +00:00
Dom Dwyer cd4087e00d style: add no todo!() or dbg!() lints
Some crates had theme, some not - lets be consistent and have the
compiler spot dbg!() and todo!() macro calls - they should never be in
prod code!
2022-09-29 13:10:07 +02:00
Andrew Lamb 66dbb9541f
chore: Update datafusion and `arrow`/`parquet`/`arrow-flight` to 23.0.0, `thrift` to 0.16.0 (#5694)
* chore: Update datafusion and `arrow`/`parquet`/`arrow-flight`  to 23.0.0

* chore: Update thrift / remove parquet_format

* fix: Update APIs

* chore: Update lock + Run cargo hakari tasks

* fix: use patched version of arrow-rs to work around https://github.com/apache/arrow-rs/issues/2779

* chore: Run cargo hakari tasks

Co-authored-by: CircleCI[bot] <circleci@influxdata.com>
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-09-27 12:50:54 +00:00
Nga Tran 75ff805ee2
feat: instead of adding num_files and memory budget into the reason text column, let us create differnt columns for them. We will be able to filter them easily (#5742)
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-09-26 20:14:04 +00:00