1419 lines
35 KiB
Go
1419 lines
35 KiB
Go
package tsm1
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import (
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"bytes"
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"context"
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"fmt"
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"io/ioutil"
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"math"
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"os"
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"path/filepath"
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"sort"
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"strconv"
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"strings"
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"sync"
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"sync/atomic"
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"time"
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"github.com/influxdata/influxdb/models"
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"github.com/influxdata/influxdb/pkg/metrics"
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"github.com/influxdata/influxdb/query"
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"github.com/uber-go/zap"
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)
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// TSMFile represents an on-disk TSM file.
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type TSMFile interface {
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// Path returns the underlying file path for the TSMFile. If the file
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// has not be written or loaded from disk, the zero value is returned.
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Path() string
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// Read returns all the values in the block where time t resides.
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Read(key []byte, t int64) ([]Value, error)
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// ReadAt returns all the values in the block identified by entry.
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ReadAt(entry *IndexEntry, values []Value) ([]Value, error)
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ReadFloatBlockAt(entry *IndexEntry, values *[]FloatValue) ([]FloatValue, error)
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ReadIntegerBlockAt(entry *IndexEntry, values *[]IntegerValue) ([]IntegerValue, error)
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ReadUnsignedBlockAt(entry *IndexEntry, values *[]UnsignedValue) ([]UnsignedValue, error)
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ReadStringBlockAt(entry *IndexEntry, values *[]StringValue) ([]StringValue, error)
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ReadBooleanBlockAt(entry *IndexEntry, values *[]BooleanValue) ([]BooleanValue, error)
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// Entries returns the index entries for all blocks for the given key.
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Entries(key []byte) []IndexEntry
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ReadEntries(key []byte, entries *[]IndexEntry) []IndexEntry
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// Returns true if the TSMFile may contain a value with the specified
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// key and time.
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ContainsValue(key []byte, t int64) bool
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// Contains returns true if the file contains any values for the given
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// key.
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Contains(key []byte) bool
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// TimeRange returns the min and max time across all keys in the file.
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TimeRange() (int64, int64)
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// TombstoneRange returns ranges of time that are deleted for the given key.
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TombstoneRange(key []byte) []TimeRange
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// KeyRange returns the min and max keys in the file.
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KeyRange() ([]byte, []byte)
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// KeyCount returns the number of distinct keys in the file.
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KeyCount() int
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// KeyAt returns the key located at index position idx.
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KeyAt(idx int) ([]byte, byte)
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// Type returns the block type of the values stored for the key. Returns one of
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// BlockFloat64, BlockInt64, BlockBoolean, BlockString. If key does not exist,
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// an error is returned.
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Type(key []byte) (byte, error)
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// Delete removes the keys from the set of keys available in this file.
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Delete(keys [][]byte) error
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// DeleteRange removes the values for keys between timestamps min and max.
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DeleteRange(keys [][]byte, min, max int64) error
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// HasTombstones returns true if file contains values that have been deleted.
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HasTombstones() bool
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// TombstoneFiles returns the tombstone filestats if there are any tombstones
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// written for this file.
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TombstoneFiles() []FileStat
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// Close closes the underlying file resources.
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Close() error
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// Size returns the size of the file on disk in bytes.
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Size() uint32
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// Rename renames the existing TSM file to a new name and replaces the mmap backing slice using the new
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// file name. Index and Reader state are not re-initialized.
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Rename(path string) error
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// Remove deletes the file from the filesystem.
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Remove() error
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// InUse returns true if the file is currently in use by queries.
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InUse() bool
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// Ref records that this file is actively in use.
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Ref()
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// Unref records that this file is no longer in use.
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Unref()
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// Stats returns summary information about the TSM file.
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Stats() FileStat
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// BlockIterator returns an iterator pointing to the first block in the file and
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// allows sequential iteration to each and every block.
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BlockIterator() *BlockIterator
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// Free releases any resources held by the FileStore to free up system resources.
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Free() error
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}
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// Statistics gathered by the FileStore.
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const (
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statFileStoreBytes = "diskBytes"
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statFileStoreCount = "numFiles"
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)
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var (
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floatBlocksDecodedCounter = metrics.MustRegisterCounter("float_blocks_decoded", metrics.WithGroup(tsmGroup))
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floatBlocksSizeCounter = metrics.MustRegisterCounter("float_blocks_size_bytes", metrics.WithGroup(tsmGroup))
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integerBlocksDecodedCounter = metrics.MustRegisterCounter("integer_blocks_decoded", metrics.WithGroup(tsmGroup))
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integerBlocksSizeCounter = metrics.MustRegisterCounter("integer_blocks_size_bytes", metrics.WithGroup(tsmGroup))
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unsignedBlocksDecodedCounter = metrics.MustRegisterCounter("unsigned_blocks_decoded", metrics.WithGroup(tsmGroup))
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unsignedBlocksSizeCounter = metrics.MustRegisterCounter("unsigned_blocks_size_bytes", metrics.WithGroup(tsmGroup))
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stringBlocksDecodedCounter = metrics.MustRegisterCounter("string_blocks_decoded", metrics.WithGroup(tsmGroup))
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stringBlocksSizeCounter = metrics.MustRegisterCounter("string_blocks_size_bytes", metrics.WithGroup(tsmGroup))
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booleanBlocksDecodedCounter = metrics.MustRegisterCounter("boolean_blocks_decoded", metrics.WithGroup(tsmGroup))
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booleanBlocksSizeCounter = metrics.MustRegisterCounter("boolean_blocks_size_bytes", metrics.WithGroup(tsmGroup))
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)
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// FileStore is an abstraction around multiple TSM files.
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type FileStore struct {
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mu sync.RWMutex
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lastModified time.Time
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// Most recently known file stats. If nil then stats will need to be
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// recalculated
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lastFileStats []FileStat
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currentGeneration int
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dir string
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files []TSMFile
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logger zap.Logger // Logger to be used for important messages
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traceLogger zap.Logger // Logger to be used when trace-logging is on.
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traceLogging bool
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stats *FileStoreStatistics
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purger *purger
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currentTempDirID int
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}
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// FileStat holds information about a TSM file on disk.
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type FileStat struct {
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Path string
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HasTombstone bool
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Size uint32
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LastModified int64
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MinTime, MaxTime int64
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MinKey, MaxKey []byte
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}
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// OverlapsTimeRange returns true if the time range of the file intersect min and max.
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func (f FileStat) OverlapsTimeRange(min, max int64) bool {
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return f.MinTime <= max && f.MaxTime >= min
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}
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// OverlapsKeyRange returns true if the min and max keys of the file overlap the arguments min and max.
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func (f FileStat) OverlapsKeyRange(min, max []byte) bool {
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return len(min) != 0 && len(max) != 0 && bytes.Compare(f.MinKey, max) <= 0 && bytes.Compare(f.MaxKey, min) >= 0
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}
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// ContainsKey returns true if the min and max keys of the file overlap the arguments min and max.
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func (f FileStat) ContainsKey(key []byte) bool {
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return bytes.Compare(f.MinKey, key) >= 0 || bytes.Compare(key, f.MaxKey) <= 0
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}
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// NewFileStore returns a new instance of FileStore based on the given directory.
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func NewFileStore(dir string) *FileStore {
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logger := zap.New(zap.NullEncoder())
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fs := &FileStore{
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dir: dir,
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lastModified: time.Time{},
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logger: logger,
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traceLogger: logger,
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stats: &FileStoreStatistics{},
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purger: &purger{
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files: map[string]TSMFile{},
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logger: logger,
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},
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}
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fs.purger.fileStore = fs
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return fs
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}
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// enableTraceLogging must be called before the FileStore is opened.
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func (f *FileStore) enableTraceLogging(enabled bool) {
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f.traceLogging = enabled
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if enabled {
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f.traceLogger = f.logger
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}
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}
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// WithLogger sets the logger on the file store.
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func (f *FileStore) WithLogger(log zap.Logger) {
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f.logger = log.With(zap.String("service", "filestore"))
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f.purger.logger = f.logger
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if f.traceLogging {
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f.traceLogger = f.logger
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}
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}
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// FileStoreStatistics keeps statistics about the file store.
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type FileStoreStatistics struct {
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DiskBytes int64
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FileCount int64
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}
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// Statistics returns statistics for periodic monitoring.
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func (f *FileStore) Statistics(tags map[string]string) []models.Statistic {
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return []models.Statistic{{
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Name: "tsm1_filestore",
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Tags: tags,
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Values: map[string]interface{}{
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statFileStoreBytes: atomic.LoadInt64(&f.stats.DiskBytes),
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statFileStoreCount: atomic.LoadInt64(&f.stats.FileCount),
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},
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}}
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}
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// Count returns the number of TSM files currently loaded.
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func (f *FileStore) Count() int {
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f.mu.RLock()
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defer f.mu.RUnlock()
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return len(f.files)
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}
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// Files returns the slice of TSM files currently loaded.
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func (f *FileStore) Files() []TSMFile {
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f.mu.RLock()
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defer f.mu.RUnlock()
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return f.files
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}
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// Free releases any resources held by the FileStore. The resources will be re-acquired
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// if necessary if they are needed after freeing them.
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func (f *FileStore) Free() error {
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f.mu.RLock()
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defer f.mu.RUnlock()
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for _, f := range f.files {
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if err := f.Free(); err != nil {
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return err
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}
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}
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return nil
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}
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// CurrentGeneration returns the current generation of the TSM files.
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func (f *FileStore) CurrentGeneration() int {
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f.mu.RLock()
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defer f.mu.RUnlock()
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return f.currentGeneration
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}
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// NextGeneration increments the max file ID and returns the new value.
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func (f *FileStore) NextGeneration() int {
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f.mu.Lock()
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defer f.mu.Unlock()
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f.currentGeneration++
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return f.currentGeneration
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}
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// WalkKeys calls fn for every key in every TSM file known to the FileStore. If the key
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// exists in multiple files, it will be invoked for each file.
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func (f *FileStore) WalkKeys(fn func(key []byte, typ byte) error) error {
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f.mu.RLock()
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if len(f.files) == 0 {
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f.mu.RUnlock()
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return nil
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}
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readers := make([]chan seriesKey, 0, len(f.files))
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for _, f := range f.files {
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ch := make(chan seriesKey, 1)
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readers = append(readers, ch)
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go func(c chan seriesKey, r TSMFile) {
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n := r.KeyCount()
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for i := 0; i < n; i++ {
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key, typ := r.KeyAt(i)
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c <- seriesKey{key, typ}
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}
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close(ch)
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}(ch, f)
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}
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f.mu.RUnlock()
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merged := merge(readers...)
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for v := range merged {
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if err := fn(v.key, v.typ); err != nil {
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return err
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}
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}
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return nil
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}
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// Keys returns all keys and types for all files in the file store.
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func (f *FileStore) Keys() map[string]byte {
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f.mu.RLock()
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defer f.mu.RUnlock()
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uniqueKeys := map[string]byte{}
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if err := f.WalkKeys(func(key []byte, typ byte) error {
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uniqueKeys[string(key)] = typ
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return nil
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}); err != nil {
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return nil
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}
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return uniqueKeys
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}
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// Type returns the type of values store at the block for key.
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func (f *FileStore) Type(key []byte) (byte, error) {
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f.mu.RLock()
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defer f.mu.RUnlock()
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for _, f := range f.files {
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if f.Contains(key) {
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return f.Type(key)
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}
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}
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return 0, fmt.Errorf("unknown type for %v", key)
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}
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// Delete removes the keys from the set of keys available in this file.
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func (f *FileStore) Delete(keys [][]byte) error {
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return f.DeleteRange(keys, math.MinInt64, math.MaxInt64)
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}
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// DeleteRange removes the values for keys between timestamps min and max.
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func (f *FileStore) DeleteRange(keys [][]byte, min, max int64) error {
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if err := f.walkFiles(func(tsm TSMFile) error {
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return tsm.DeleteRange(keys, min, max)
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}); err != nil {
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return err
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}
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f.mu.Lock()
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f.lastModified = time.Now().UTC()
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f.lastFileStats = nil
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f.mu.Unlock()
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return nil
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}
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// Open loads all the TSM files in the configured directory.
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func (f *FileStore) Open() error {
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f.mu.Lock()
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defer f.mu.Unlock()
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// Not loading files from disk so nothing to do
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if f.dir == "" {
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return nil
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}
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// find the current max ID for temp directories
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tmpfiles, err := ioutil.ReadDir(f.dir)
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if err != nil {
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return err
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}
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for _, fi := range tmpfiles {
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if fi.IsDir() && strings.HasSuffix(fi.Name(), ".tmp") {
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ss := strings.Split(filepath.Base(fi.Name()), ".")
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if len(ss) == 2 {
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if i, err := strconv.Atoi(ss[0]); err != nil {
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if i > f.currentTempDirID {
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f.currentTempDirID = i
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}
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}
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}
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}
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}
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files, err := filepath.Glob(filepath.Join(f.dir, fmt.Sprintf("*.%s", TSMFileExtension)))
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if err != nil {
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return err
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}
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// struct to hold the result of opening each reader in a goroutine
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type res struct {
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r *TSMReader
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err error
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}
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readerC := make(chan *res)
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for i, fn := range files {
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// Keep track of the latest ID
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generation, _, err := ParseTSMFileName(fn)
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if err != nil {
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return err
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}
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if generation >= f.currentGeneration {
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f.currentGeneration = generation + 1
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}
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file, err := os.OpenFile(fn, os.O_RDONLY, 0666)
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if err != nil {
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return fmt.Errorf("error opening file %s: %v", fn, err)
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}
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go func(idx int, file *os.File) {
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start := time.Now()
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df, err := NewTSMReader(file)
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f.logger.Info(fmt.Sprintf("%s (#%d) opened in %v", file.Name(), idx, time.Since(start)))
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if err != nil {
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readerC <- &res{r: df, err: fmt.Errorf("error opening memory map for file %s: %v", file.Name(), err)}
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return
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}
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readerC <- &res{r: df}
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}(i, file)
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}
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var lm int64
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for range files {
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res := <-readerC
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if res.err != nil {
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return res.err
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}
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f.files = append(f.files, res.r)
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// Accumulate file store size stats
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atomic.AddInt64(&f.stats.DiskBytes, int64(res.r.Size()))
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for _, ts := range res.r.TombstoneFiles() {
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atomic.AddInt64(&f.stats.DiskBytes, int64(ts.Size))
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}
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// Re-initialize the lastModified time for the file store
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if res.r.LastModified() > lm {
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lm = res.r.LastModified()
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}
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}
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f.lastModified = time.Unix(0, lm)
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close(readerC)
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sort.Sort(tsmReaders(f.files))
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atomic.StoreInt64(&f.stats.FileCount, int64(len(f.files)))
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return nil
|
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}
|
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|
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// Close closes the file store.
|
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func (f *FileStore) Close() error {
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f.mu.Lock()
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defer f.mu.Unlock()
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|
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for _, file := range f.files {
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file.Close()
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}
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|
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f.lastFileStats = nil
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f.files = nil
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atomic.StoreInt64(&f.stats.FileCount, 0)
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return nil
|
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}
|
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|
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func (f *FileStore) DiskSizeBytes() int64 {
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return atomic.LoadInt64(&f.stats.DiskBytes)
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}
|
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|
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// Read returns the slice of values for the given key and the given timestamp,
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// if any file matches those constraints.
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func (f *FileStore) Read(key []byte, t int64) ([]Value, error) {
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f.mu.RLock()
|
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defer f.mu.RUnlock()
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|
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for _, f := range f.files {
|
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// Can this file possibly contain this key and timestamp?
|
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if !f.Contains(key) {
|
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continue
|
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}
|
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|
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// May have the key and time we are looking for so try to find
|
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v, err := f.Read(key, t)
|
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if err != nil {
|
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return nil, err
|
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}
|
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|
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if len(v) > 0 {
|
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return v, nil
|
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}
|
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}
|
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return nil, nil
|
|
}
|
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|
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func (f *FileStore) Cost(key []byte, min, max int64) query.IteratorCost {
|
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f.mu.RLock()
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defer f.mu.RUnlock()
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return f.cost(key, min, max)
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}
|
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|
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// Reader returns a TSMReader for path if one is currently managed by the FileStore.
|
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// Otherwise it returns nil.
|
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func (f *FileStore) TSMReader(path string) *TSMReader {
|
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f.mu.RLock()
|
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defer f.mu.RUnlock()
|
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for _, r := range f.files {
|
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if r.Path() == path {
|
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return r.(*TSMReader)
|
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}
|
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}
|
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return nil
|
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}
|
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|
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// KeyCursor returns a KeyCursor for key and t across the files in the FileStore.
|
|
func (f *FileStore) KeyCursor(ctx context.Context, key []byte, t int64, ascending bool) *KeyCursor {
|
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f.mu.RLock()
|
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defer f.mu.RUnlock()
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return newKeyCursor(ctx, f, key, t, ascending)
|
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}
|
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|
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// Stats returns the stats of the underlying files, preferring the cached version if it is still valid.
|
|
func (f *FileStore) Stats() []FileStat {
|
|
f.mu.RLock()
|
|
if len(f.lastFileStats) > 0 {
|
|
defer f.mu.RUnlock()
|
|
return f.lastFileStats
|
|
}
|
|
f.mu.RUnlock()
|
|
|
|
// The file stats cache is invalid due to changes to files. Need to
|
|
// recalculate.
|
|
f.mu.Lock()
|
|
defer f.mu.Unlock()
|
|
|
|
if len(f.lastFileStats) > 0 {
|
|
return f.lastFileStats
|
|
}
|
|
|
|
// If lastFileStats's capacity is far away from the number of entries
|
|
// we need to add, then we'll reallocate.
|
|
if cap(f.lastFileStats) < len(f.files)/2 {
|
|
f.lastFileStats = make([]FileStat, 0, len(f.files))
|
|
}
|
|
|
|
for _, fd := range f.files {
|
|
f.lastFileStats = append(f.lastFileStats, fd.Stats())
|
|
}
|
|
return f.lastFileStats
|
|
}
|
|
|
|
// ReplaceWithCallback replaces oldFiles with newFiles and calls updatedFn with the files to be added the FileStore.
|
|
func (f *FileStore) ReplaceWithCallback(oldFiles, newFiles []string, updatedFn func(r []TSMFile)) error {
|
|
return f.replace(oldFiles, newFiles, updatedFn)
|
|
}
|
|
|
|
// Replace replaces oldFiles with newFiles.
|
|
func (f *FileStore) Replace(oldFiles, newFiles []string) error {
|
|
return f.replace(oldFiles, newFiles, nil)
|
|
}
|
|
|
|
func (f *FileStore) replace(oldFiles, newFiles []string, updatedFn func(r []TSMFile)) error {
|
|
if len(oldFiles) == 0 && len(newFiles) == 0 {
|
|
return nil
|
|
}
|
|
|
|
f.mu.RLock()
|
|
maxTime := f.lastModified
|
|
f.mu.RUnlock()
|
|
|
|
updated := make([]TSMFile, 0, len(newFiles))
|
|
|
|
// Rename all the new files to make them live on restart
|
|
for _, file := range newFiles {
|
|
var newName = file
|
|
if strings.HasSuffix(file, ".tmp") {
|
|
// The new TSM files have a tmp extension. First rename them.
|
|
newName = file[:len(file)-4]
|
|
if err := os.Rename(file, newName); err != nil {
|
|
return err
|
|
}
|
|
}
|
|
|
|
fd, err := os.Open(newName)
|
|
if err != nil {
|
|
return err
|
|
}
|
|
|
|
// Keep track of the new mod time
|
|
if stat, err := fd.Stat(); err == nil {
|
|
if stat.ModTime().UTC().After(maxTime) {
|
|
maxTime = stat.ModTime().UTC()
|
|
}
|
|
}
|
|
|
|
tsm, err := NewTSMReader(fd)
|
|
if err != nil {
|
|
return err
|
|
}
|
|
updated = append(updated, tsm)
|
|
}
|
|
|
|
if updatedFn != nil {
|
|
updatedFn(updated)
|
|
}
|
|
|
|
f.mu.Lock()
|
|
defer f.mu.Unlock()
|
|
|
|
// Copy the current set of active files while we rename
|
|
// and load the new files. We copy the pointers here to minimize
|
|
// the time that locks are held as well as to ensure that the replacement
|
|
// is atomic.©
|
|
|
|
updated = append(updated, f.files...)
|
|
|
|
// We need to prune our set of active files now
|
|
var active, inuse []TSMFile
|
|
for _, file := range updated {
|
|
keep := true
|
|
for _, remove := range oldFiles {
|
|
if remove == file.Path() {
|
|
keep = false
|
|
|
|
// If queries are running against this file, then we need to move it out of the
|
|
// way and let them complete. We'll then delete the original file to avoid
|
|
// blocking callers upstream. If the process crashes, the temp file is
|
|
// cleaned up at startup automatically.
|
|
if file.InUse() {
|
|
// Copy all the tombstones related to this TSM file
|
|
var deletes []string
|
|
for _, t := range file.TombstoneFiles() {
|
|
deletes = append(deletes, t.Path)
|
|
}
|
|
deletes = append(deletes, file.Path())
|
|
|
|
// Rename the TSM file used by this reader
|
|
tempPath := file.Path() + ".tmp"
|
|
if err := file.Rename(tempPath); err != nil {
|
|
return err
|
|
}
|
|
|
|
// Remove the old file and tombstones. We can't use the normal TSMReader.Remove()
|
|
// because it now refers to our temp file which we can't remove.
|
|
for _, f := range deletes {
|
|
if err := os.RemoveAll(f); err != nil {
|
|
return err
|
|
}
|
|
}
|
|
|
|
inuse = append(inuse, file)
|
|
continue
|
|
}
|
|
|
|
if err := file.Close(); err != nil {
|
|
return err
|
|
}
|
|
|
|
if err := file.Remove(); err != nil {
|
|
return err
|
|
}
|
|
break
|
|
}
|
|
}
|
|
|
|
if keep {
|
|
active = append(active, file)
|
|
}
|
|
}
|
|
|
|
if err := syncDir(f.dir); err != nil {
|
|
return err
|
|
}
|
|
|
|
// Tell the purger about our in-use files we need to remove
|
|
f.purger.add(inuse)
|
|
|
|
// If times didn't change (which can happen since file mod times are second level),
|
|
// then add a ns to the time to ensure that lastModified changes since files on disk
|
|
// actually did change
|
|
if maxTime.Equal(f.lastModified) || maxTime.Before(f.lastModified) {
|
|
maxTime = f.lastModified.UTC().Add(1)
|
|
}
|
|
|
|
f.lastModified = maxTime.UTC()
|
|
|
|
f.lastFileStats = nil
|
|
f.files = active
|
|
sort.Sort(tsmReaders(f.files))
|
|
atomic.StoreInt64(&f.stats.FileCount, int64(len(f.files)))
|
|
|
|
// Recalculate the disk size stat
|
|
var totalSize int64
|
|
for _, file := range f.files {
|
|
totalSize += int64(file.Size())
|
|
for _, ts := range file.TombstoneFiles() {
|
|
totalSize += int64(ts.Size)
|
|
}
|
|
|
|
}
|
|
atomic.StoreInt64(&f.stats.DiskBytes, totalSize)
|
|
|
|
return nil
|
|
}
|
|
|
|
// LastModified returns the last time the file store was updated with new
|
|
// TSM files or a delete.
|
|
func (f *FileStore) LastModified() time.Time {
|
|
f.mu.RLock()
|
|
defer f.mu.RUnlock()
|
|
|
|
return f.lastModified
|
|
}
|
|
|
|
// BlockCount returns number of values stored in the block at location idx
|
|
// in the file at path. If path does not match any file in the store, 0 is
|
|
// returned. If idx is out of range for the number of blocks in the file,
|
|
// 0 is returned.
|
|
func (f *FileStore) BlockCount(path string, idx int) int {
|
|
f.mu.RLock()
|
|
defer f.mu.RUnlock()
|
|
|
|
if idx < 0 {
|
|
return 0
|
|
}
|
|
|
|
for _, fd := range f.files {
|
|
if fd.Path() == path {
|
|
iter := fd.BlockIterator()
|
|
for i := 0; i < idx; i++ {
|
|
if !iter.Next() {
|
|
return 0
|
|
}
|
|
}
|
|
_, _, _, _, _, block, _ := iter.Read()
|
|
return BlockCount(block)
|
|
}
|
|
}
|
|
return 0
|
|
}
|
|
|
|
// walkFiles calls fn for each file in filestore in parallel.
|
|
func (f *FileStore) walkFiles(fn func(f TSMFile) error) error {
|
|
// Copy the current TSM files to prevent a slow walker from
|
|
// blocking other operations.
|
|
f.mu.RLock()
|
|
files := make([]TSMFile, len(f.files))
|
|
copy(files, f.files)
|
|
f.mu.RUnlock()
|
|
|
|
// struct to hold the result of opening each reader in a goroutine
|
|
errC := make(chan error, len(files))
|
|
for _, f := range files {
|
|
go func(tsm TSMFile) {
|
|
if err := fn(tsm); err != nil {
|
|
errC <- fmt.Errorf("file %s: %s", tsm.Path(), err)
|
|
return
|
|
}
|
|
|
|
errC <- nil
|
|
}(f)
|
|
}
|
|
|
|
for i := 0; i < cap(errC); i++ {
|
|
res := <-errC
|
|
if res != nil {
|
|
return res
|
|
}
|
|
}
|
|
return nil
|
|
}
|
|
|
|
// We need to determine the possible files that may be accessed by this query given
|
|
// the time range.
|
|
func (f *FileStore) cost(key []byte, min, max int64) query.IteratorCost {
|
|
var cache []IndexEntry
|
|
cost := query.IteratorCost{}
|
|
for _, fd := range f.files {
|
|
minTime, maxTime := fd.TimeRange()
|
|
if !(maxTime > min && minTime < max) {
|
|
continue
|
|
}
|
|
skipped := true
|
|
tombstones := fd.TombstoneRange(key)
|
|
|
|
entries := fd.ReadEntries(key, &cache)
|
|
ENTRIES:
|
|
for i := 0; i < len(entries); i++ {
|
|
ie := entries[i]
|
|
|
|
if !(ie.MaxTime > min && ie.MinTime < max) {
|
|
continue
|
|
}
|
|
|
|
// Skip any blocks only contain values that are tombstoned.
|
|
for _, t := range tombstones {
|
|
if t.Min <= ie.MinTime && t.Max >= ie.MaxTime {
|
|
continue ENTRIES
|
|
}
|
|
}
|
|
|
|
cost.BlocksRead++
|
|
cost.BlockSize += int64(ie.Size)
|
|
skipped = false
|
|
}
|
|
|
|
if !skipped {
|
|
cost.NumFiles++
|
|
}
|
|
}
|
|
return cost
|
|
}
|
|
|
|
// locations returns the files and index blocks for a key and time. ascending indicates
|
|
// whether the key will be scan in ascending time order or descenging time order.
|
|
// This function assumes the read-lock has been taken.
|
|
func (f *FileStore) locations(key []byte, t int64, ascending bool) []*location {
|
|
var cache []IndexEntry
|
|
locations := make([]*location, 0, len(f.files))
|
|
for _, fd := range f.files {
|
|
minTime, maxTime := fd.TimeRange()
|
|
|
|
// If we ascending and the max time of the file is before where we want to start
|
|
// skip it.
|
|
if ascending && maxTime < t {
|
|
continue
|
|
// If we are descending and the min time of the file is after where we want to start,
|
|
// then skip it.
|
|
} else if !ascending && minTime > t {
|
|
continue
|
|
}
|
|
tombstones := fd.TombstoneRange(key)
|
|
|
|
// This file could potential contain points we are looking for so find the blocks for
|
|
// the given key.
|
|
entries := fd.ReadEntries(key, &cache)
|
|
LOOP:
|
|
for i := 0; i < len(entries); i++ {
|
|
ie := entries[i]
|
|
|
|
// Skip any blocks only contain values that are tombstoned.
|
|
for _, t := range tombstones {
|
|
if t.Min <= ie.MinTime && t.Max >= ie.MaxTime {
|
|
continue LOOP
|
|
}
|
|
}
|
|
|
|
// If we ascending and the max time of a block is before where we are looking, skip
|
|
// it since the data is out of our range
|
|
if ascending && ie.MaxTime < t {
|
|
continue
|
|
// If we descending and the min time of a block is after where we are looking, skip
|
|
// it since the data is out of our range
|
|
} else if !ascending && ie.MinTime > t {
|
|
continue
|
|
}
|
|
|
|
location := &location{
|
|
r: fd,
|
|
entry: ie,
|
|
}
|
|
|
|
if ascending {
|
|
// For an ascending cursor, mark everything before the seek time as read
|
|
// so we can filter it out at query time
|
|
location.readMin = math.MinInt64
|
|
location.readMax = t - 1
|
|
} else {
|
|
// For an ascending cursort, mark everything after the seek time as read
|
|
// so we can filter it out at query time
|
|
location.readMin = t + 1
|
|
location.readMax = math.MaxInt64
|
|
}
|
|
// Otherwise, add this file and block location
|
|
locations = append(locations, location)
|
|
}
|
|
}
|
|
return locations
|
|
}
|
|
|
|
// CreateSnapshot creates hardlinks for all tsm and tombstone files
|
|
// in the path provided.
|
|
func (f *FileStore) CreateSnapshot() (string, error) {
|
|
f.traceLogger.Info(fmt.Sprintf("Creating snapshot in %s", f.dir))
|
|
files := f.Files()
|
|
|
|
f.mu.Lock()
|
|
f.currentTempDirID += 1
|
|
f.mu.Unlock()
|
|
|
|
f.mu.RLock()
|
|
defer f.mu.RUnlock()
|
|
|
|
// get a tmp directory name
|
|
tmpPath := fmt.Sprintf("%s/%d.tmp", f.dir, f.currentTempDirID)
|
|
err := os.Mkdir(tmpPath, 0777)
|
|
if err != nil {
|
|
return "", err
|
|
}
|
|
|
|
for _, tsmf := range files {
|
|
newpath := filepath.Join(tmpPath, filepath.Base(tsmf.Path()))
|
|
if err := os.Link(tsmf.Path(), newpath); err != nil {
|
|
return "", fmt.Errorf("error creating tsm hard link: %q", err)
|
|
}
|
|
// Check for tombstones and link those as well
|
|
for _, tf := range tsmf.TombstoneFiles() {
|
|
newpath := filepath.Join(tmpPath, filepath.Base(tf.Path))
|
|
if err := os.Link(tf.Path, newpath); err != nil {
|
|
return "", fmt.Errorf("error creating tombstone hard link: %q", err)
|
|
}
|
|
}
|
|
}
|
|
|
|
return tmpPath, nil
|
|
}
|
|
|
|
// ParseTSMFileName parses the generation and sequence from a TSM file name.
|
|
func ParseTSMFileName(name string) (int, int, error) {
|
|
base := filepath.Base(name)
|
|
idx := strings.Index(base, ".")
|
|
if idx == -1 {
|
|
return 0, 0, fmt.Errorf("file %s is named incorrectly", name)
|
|
}
|
|
|
|
id := base[:idx]
|
|
|
|
idx = strings.Index(id, "-")
|
|
if idx == -1 {
|
|
return 0, 0, fmt.Errorf("file %s is named incorrectly", name)
|
|
}
|
|
|
|
generation, err := strconv.ParseUint(id[:idx], 10, 32)
|
|
if err != nil {
|
|
return 0, 0, fmt.Errorf("file %s is named incorrectly", name)
|
|
}
|
|
|
|
sequence, err := strconv.ParseUint(id[idx+1:], 10, 32)
|
|
if err != nil {
|
|
return 0, 0, fmt.Errorf("file %s is named incorrectly", name)
|
|
}
|
|
|
|
return int(generation), int(sequence), nil
|
|
}
|
|
|
|
// KeyCursor allows iteration through keys in a set of files within a FileStore.
|
|
type KeyCursor struct {
|
|
key []byte
|
|
|
|
// seeks is all the file locations that we need to return during iteration.
|
|
seeks []*location
|
|
|
|
// current is the set of blocks possibly containing the next set of points.
|
|
// Normally this is just one entry, but there may be multiple if points have
|
|
// been overwritten.
|
|
current []*location
|
|
buf []Value
|
|
|
|
ctx context.Context
|
|
col *metrics.Group
|
|
|
|
// pos is the index within seeks. Based on ascending, it will increment or
|
|
// decrement through the size of seeks slice.
|
|
pos int
|
|
ascending bool
|
|
|
|
// duplicates is a hint that there are overlapping blocks for this key in
|
|
// multiple files (e.g. points have been overwritten but not fully compacted)
|
|
// If this is true, we need to scan the duplicate blocks and dedup the points
|
|
// as query time until they are compacted.
|
|
duplicates bool
|
|
}
|
|
|
|
type location struct {
|
|
r TSMFile
|
|
entry IndexEntry
|
|
|
|
readMin, readMax int64
|
|
}
|
|
|
|
func (l *location) read() bool {
|
|
return l.readMin <= l.entry.MinTime && l.readMax >= l.entry.MaxTime
|
|
}
|
|
|
|
func (l *location) markRead(min, max int64) {
|
|
if min < l.readMin {
|
|
l.readMin = min
|
|
}
|
|
|
|
if max > l.readMax {
|
|
l.readMax = max
|
|
}
|
|
}
|
|
|
|
type descLocations []*location
|
|
|
|
// Sort methods
|
|
func (a descLocations) Len() int { return len(a) }
|
|
func (a descLocations) Swap(i, j int) { a[i], a[j] = a[j], a[i] }
|
|
func (a descLocations) Less(i, j int) bool {
|
|
if a[i].entry.OverlapsTimeRange(a[j].entry.MinTime, a[j].entry.MaxTime) {
|
|
return a[i].r.Path() < a[j].r.Path()
|
|
}
|
|
return a[i].entry.MaxTime < a[j].entry.MaxTime
|
|
}
|
|
|
|
type ascLocations []*location
|
|
|
|
// Sort methods
|
|
func (a ascLocations) Len() int { return len(a) }
|
|
func (a ascLocations) Swap(i, j int) { a[i], a[j] = a[j], a[i] }
|
|
func (a ascLocations) Less(i, j int) bool {
|
|
if a[i].entry.OverlapsTimeRange(a[j].entry.MinTime, a[j].entry.MaxTime) {
|
|
return a[i].r.Path() < a[j].r.Path()
|
|
}
|
|
return a[i].entry.MinTime < a[j].entry.MinTime
|
|
}
|
|
|
|
// newKeyCursor returns a new instance of KeyCursor.
|
|
// This function assumes the read-lock has been taken.
|
|
func newKeyCursor(ctx context.Context, fs *FileStore, key []byte, t int64, ascending bool) *KeyCursor {
|
|
c := &KeyCursor{
|
|
key: key,
|
|
seeks: fs.locations(key, t, ascending),
|
|
ctx: ctx,
|
|
col: metrics.GroupFromContext(ctx),
|
|
ascending: ascending,
|
|
}
|
|
|
|
c.duplicates = c.hasOverlappingBlocks()
|
|
|
|
if ascending {
|
|
sort.Sort(ascLocations(c.seeks))
|
|
} else {
|
|
sort.Sort(descLocations(c.seeks))
|
|
}
|
|
|
|
// Determine the distinct set of TSM files in use and mark then as in-use
|
|
for _, f := range c.seeks {
|
|
f.r.Ref()
|
|
}
|
|
|
|
c.seek(t)
|
|
return c
|
|
}
|
|
|
|
// Close removes all references on the cursor.
|
|
func (c *KeyCursor) Close() {
|
|
// Remove all of our in-use references since we're done
|
|
for _, f := range c.seeks {
|
|
f.r.Unref()
|
|
}
|
|
|
|
c.buf = nil
|
|
c.seeks = nil
|
|
c.current = nil
|
|
}
|
|
|
|
// hasOverlappingBlocks returns true if blocks have overlapping time ranges.
|
|
// This result is computed once and stored as the "duplicates" field.
|
|
func (c *KeyCursor) hasOverlappingBlocks() bool {
|
|
if len(c.seeks) == 0 {
|
|
return false
|
|
}
|
|
|
|
for i := 1; i < len(c.seeks); i++ {
|
|
prev := c.seeks[i-1]
|
|
cur := c.seeks[i]
|
|
if prev.entry.MaxTime >= cur.entry.MinTime {
|
|
return true
|
|
}
|
|
}
|
|
return false
|
|
}
|
|
|
|
// seek positions the cursor at the given time.
|
|
func (c *KeyCursor) seek(t int64) {
|
|
if len(c.seeks) == 0 {
|
|
return
|
|
}
|
|
c.current = nil
|
|
|
|
if c.ascending {
|
|
c.seekAscending(t)
|
|
} else {
|
|
c.seekDescending(t)
|
|
}
|
|
}
|
|
|
|
func (c *KeyCursor) seekAscending(t int64) {
|
|
for i, e := range c.seeks {
|
|
if t < e.entry.MinTime || e.entry.Contains(t) {
|
|
// Record the position of the first block matching our seek time
|
|
if len(c.current) == 0 {
|
|
c.pos = i
|
|
}
|
|
|
|
c.current = append(c.current, e)
|
|
|
|
// Exit if we don't have duplicates.
|
|
// Otherwise, keep looking for additional blocks containing this point.
|
|
if !c.duplicates {
|
|
return
|
|
}
|
|
}
|
|
}
|
|
}
|
|
|
|
func (c *KeyCursor) seekDescending(t int64) {
|
|
for i := len(c.seeks) - 1; i >= 0; i-- {
|
|
e := c.seeks[i]
|
|
if t > e.entry.MaxTime || e.entry.Contains(t) {
|
|
// Record the position of the first block matching our seek time
|
|
if len(c.current) == 0 {
|
|
c.pos = i
|
|
}
|
|
c.current = append(c.current, e)
|
|
|
|
// Exit if we don't have duplicates.
|
|
// Otherwise, keep looking for additional blocks containing this point.
|
|
if !c.duplicates {
|
|
return
|
|
}
|
|
}
|
|
}
|
|
}
|
|
|
|
// Next moves the cursor to the next position.
|
|
// Data should be read by the ReadBlock functions.
|
|
func (c *KeyCursor) Next() {
|
|
if len(c.current) == 0 {
|
|
return
|
|
}
|
|
// Do we still have unread values in the current block
|
|
if !c.current[0].read() {
|
|
return
|
|
}
|
|
c.current = c.current[:0]
|
|
if c.ascending {
|
|
c.nextAscending()
|
|
} else {
|
|
c.nextDescending()
|
|
}
|
|
}
|
|
|
|
func (c *KeyCursor) nextAscending() {
|
|
for {
|
|
c.pos++
|
|
if c.pos >= len(c.seeks) {
|
|
return
|
|
} else if !c.seeks[c.pos].read() {
|
|
break
|
|
}
|
|
}
|
|
|
|
// Append the first matching block
|
|
if len(c.current) == 0 {
|
|
c.current = append(c.current, nil)
|
|
} else {
|
|
c.current = c.current[:1]
|
|
}
|
|
c.current[0] = c.seeks[c.pos]
|
|
|
|
// We're done if there are no overlapping blocks.
|
|
if !c.duplicates {
|
|
return
|
|
}
|
|
|
|
// If we have ovelapping blocks, append all their values so we can dedup
|
|
for i := c.pos + 1; i < len(c.seeks); i++ {
|
|
if c.seeks[i].read() {
|
|
continue
|
|
}
|
|
|
|
c.current = append(c.current, c.seeks[i])
|
|
}
|
|
}
|
|
|
|
func (c *KeyCursor) nextDescending() {
|
|
for {
|
|
c.pos--
|
|
if c.pos < 0 {
|
|
return
|
|
} else if !c.seeks[c.pos].read() {
|
|
break
|
|
}
|
|
}
|
|
|
|
// Append the first matching block
|
|
if len(c.current) == 0 {
|
|
c.current = make([]*location, 1)
|
|
} else {
|
|
c.current = c.current[:1]
|
|
}
|
|
c.current[0] = c.seeks[c.pos]
|
|
|
|
// We're done if there are no overlapping blocks.
|
|
if !c.duplicates {
|
|
return
|
|
}
|
|
|
|
// If we have ovelapping blocks, append all their values so we can dedup
|
|
for i := c.pos; i >= 0; i-- {
|
|
if c.seeks[i].read() {
|
|
continue
|
|
}
|
|
c.current = append(c.current, c.seeks[i])
|
|
}
|
|
}
|
|
|
|
func (c *KeyCursor) filterFloatValues(tombstones []TimeRange, values FloatValues) FloatValues {
|
|
for _, t := range tombstones {
|
|
values = values.Exclude(t.Min, t.Max)
|
|
}
|
|
return values
|
|
}
|
|
|
|
func (c *KeyCursor) filterIntegerValues(tombstones []TimeRange, values IntegerValues) IntegerValues {
|
|
for _, t := range tombstones {
|
|
values = values.Exclude(t.Min, t.Max)
|
|
}
|
|
return values
|
|
}
|
|
|
|
func (c *KeyCursor) filterUnsignedValues(tombstones []TimeRange, values UnsignedValues) UnsignedValues {
|
|
for _, t := range tombstones {
|
|
values = values.Exclude(t.Min, t.Max)
|
|
}
|
|
return values
|
|
}
|
|
|
|
func (c *KeyCursor) filterStringValues(tombstones []TimeRange, values StringValues) StringValues {
|
|
for _, t := range tombstones {
|
|
values = values.Exclude(t.Min, t.Max)
|
|
}
|
|
return values
|
|
}
|
|
|
|
func (c *KeyCursor) filterBooleanValues(tombstones []TimeRange, values BooleanValues) BooleanValues {
|
|
for _, t := range tombstones {
|
|
values = values.Exclude(t.Min, t.Max)
|
|
}
|
|
return values
|
|
}
|
|
|
|
type purger struct {
|
|
mu sync.RWMutex
|
|
fileStore *FileStore
|
|
files map[string]TSMFile
|
|
running bool
|
|
|
|
logger zap.Logger
|
|
}
|
|
|
|
func (p *purger) add(files []TSMFile) {
|
|
p.mu.Lock()
|
|
for _, f := range files {
|
|
p.files[f.Path()] = f
|
|
}
|
|
p.mu.Unlock()
|
|
p.purge()
|
|
}
|
|
|
|
func (p *purger) purge() {
|
|
p.mu.Lock()
|
|
if p.running {
|
|
p.mu.Unlock()
|
|
return
|
|
}
|
|
p.running = true
|
|
p.mu.Unlock()
|
|
|
|
go func() {
|
|
for {
|
|
p.mu.Lock()
|
|
for k, v := range p.files {
|
|
if !v.InUse() {
|
|
if err := v.Close(); err != nil {
|
|
p.logger.Info(fmt.Sprintf("purge: close file: %v", err))
|
|
continue
|
|
}
|
|
|
|
if err := v.Remove(); err != nil {
|
|
p.logger.Info(fmt.Sprintf("purge: remove file: %v", err))
|
|
continue
|
|
}
|
|
delete(p.files, k)
|
|
}
|
|
}
|
|
|
|
if len(p.files) == 0 {
|
|
p.running = false
|
|
p.mu.Unlock()
|
|
return
|
|
}
|
|
|
|
p.mu.Unlock()
|
|
time.Sleep(time.Second)
|
|
}
|
|
}()
|
|
}
|
|
|
|
type tsmReaders []TSMFile
|
|
|
|
func (a tsmReaders) Len() int { return len(a) }
|
|
func (a tsmReaders) Less(i, j int) bool { return a[i].Path() < a[j].Path() }
|
|
func (a tsmReaders) Swap(i, j int) { a[i], a[j] = a[j], a[i] }
|
|
|
|
type stream struct {
|
|
c chan seriesKey
|
|
v seriesKey
|
|
}
|
|
|
|
type seriesKey struct {
|
|
key []byte
|
|
typ byte
|
|
}
|
|
|
|
// merge merges multiple channels in parallel by recursively splitting the channels
|
|
// until a simple two-way merge can be performed.
|
|
func merge(c ...chan seriesKey) chan seriesKey {
|
|
if len(c) == 0 {
|
|
m := make(chan seriesKey)
|
|
close(m)
|
|
return m
|
|
}
|
|
|
|
// Just one, drain it
|
|
if len(c) == 1 {
|
|
m := make(chan seriesKey)
|
|
go func() {
|
|
if c[0] != nil {
|
|
for v := range c[0] {
|
|
m <- v
|
|
}
|
|
}
|
|
close(m)
|
|
}()
|
|
return m
|
|
}
|
|
|
|
// More than two, split them up recursively
|
|
if len(c) > 2 {
|
|
a := merge(c[:len(c)/2]...)
|
|
b := merge(c[len(c)/2:]...)
|
|
return merge(a, b)
|
|
}
|
|
|
|
// Merge the two streams and drop duplicates between then
|
|
m := make(chan seriesKey, 1)
|
|
a, b := c[0], c[1]
|
|
go func() {
|
|
// buffer a and b values
|
|
var av, bv seriesKey
|
|
if a != nil {
|
|
av = <-a
|
|
}
|
|
if b != nil {
|
|
bv = <-b
|
|
}
|
|
for {
|
|
if len(av.key) == 0 && len(bv.key) == 0 {
|
|
break
|
|
}
|
|
|
|
if len(av.key) == 0 {
|
|
m <- bv
|
|
break
|
|
}
|
|
|
|
if len(bv.key) == 0 {
|
|
m <- av
|
|
break
|
|
}
|
|
|
|
cmp := bytes.Compare(av.key, bv.key)
|
|
if cmp < 0 {
|
|
// Send a's value, and re-prime a buffer
|
|
m <- av
|
|
av = <-a
|
|
} else if cmp == 0 {
|
|
// Send a's value, and re-prime a and b buffers
|
|
m <- av
|
|
av = <-a
|
|
bv = <-b
|
|
} else {
|
|
// Send b's value, and re-prime b buffer
|
|
m <- bv
|
|
bv = <-b
|
|
}
|
|
}
|
|
|
|
if a != nil {
|
|
for av := range a {
|
|
m <- av
|
|
}
|
|
}
|
|
|
|
if b != nil {
|
|
for bv := range b {
|
|
m <- bv
|
|
}
|
|
}
|
|
close(m)
|
|
}()
|
|
return m
|
|
}
|