Commit Graph

55 Commits (da201ba87f230bc8b85c8300be98f21f9f6b39dd)

Author SHA1 Message Date
YIXIAO SHI 52ae60bf2e
chore: fix comment typo (#5551)
Co-authored-by: Dom <dom@itsallbroken.com>
2022-09-07 08:49:29 +00:00
Andrew Lamb 6669d85fb4
chore: Update datafusion + arrow/parquet to `21.0.0` (#5519)
* chore: Update arrow/arrow-flight/parquet to 21.0.0

* chore: Update datafusion pin

* chore: Fix arrow update script

* chore: Update Cargo.lock

* chore: Update for new API
2022-08-31 13:30:47 +00:00
Luke Bond 10fee5535a
feat: import schema updates iox catalog (#5385)
* feat: import schema updates iox catalog

- renamed import/schema module to aggregate_tsm_schema to not conflic
  with schema crate
- fetch schema from iox catalog, and validate/merge/create as needed

chore: add catalog dsn config to import schema command
chore: import schema command connects to catalog
chore: import schema merge validation errors return non-zero code
chore: simplified and tidies import update catalog code

chore: tests and refactoring of import schema catalog update

* chore: require retention on ns creation in import

* chore: fixed bad test in import schema validation

* chore: friendlier errors & more tests in import schema catalog update
2022-08-16 11:05:27 +00:00
Marco Neumann 90fec1365f
feat: intern schemas during query planning (#5215)
* feat: intern schemas during query planning

Helps with #5202.

* refactor: `SchemaMerger::build` shall return an `Arc`

* feat: `SchemaMerger::with_interner`

* refactor: hash-based schema interning
2022-08-11 12:28:51 +00:00
Andrew Lamb ce3e2c3a15
chore: make terminology in iox_query::Provider consistent (remove super notation) (#5349)
* chore: make terminology in iox_query::Provider consistent (remove super notation)

* refactor: be more specific about *which* sort key is meant

* refactor: rename another sort_key --> output_sort_key

* refactor: rename additional sort_key to output_sort_key

* refactor: rename sort_key --> chunk_sort_key

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-08-10 10:59:47 +00:00
Andrew Lamb 16ddc5efc6
chore: Update datafusion / arrow/parquet/arrow-flight and prost/tonic ecosystem (#5360)
* chore: Update datafusion and arrow

* chore: Update Cargo.lock

* chore: update to Decimal128

* chore: Update tonic/prost/pbjson/etc

* chore: Run cargo hakari tasks

* fix: doctest in generated types

Co-authored-by: CircleCI[bot] <circleci@influxdata.com>
2022-08-09 17:30:44 +00:00
Andrew Lamb e0ea335b70
fix: Support RegExMatch and RegExNotMatch predicates on `_field` (#5301)
* test: add tests for regex_match_on_field

* feat: more general `_field` predicate handling

* fix: remove old comment

* fix: update tests

* fix: improve test a little more

* fix: fmt

* fix: Update predicate/src/rpc_predicate/field_rewrite.rs

Co-authored-by: Raphael Taylor-Davies <1781103+tustvold@users.noreply.github.com>

* fix: Handle predicates that can not be evaluated

Co-authored-by: Raphael Taylor-Davies <1781103+tustvold@users.noreply.github.com>
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-08-04 19:42:16 +00:00
Andrew Lamb 9215a534d0
chore: Update datafusion and `arrow`/`parquet`/`arrow-flight` to `19.0.0` (#5229)
* chore: Update datafusion and `arrow`/`parquet`/`arrow-flight` to `19.0.0`

* chore: Run cargo hakari tasks

* fix: Update for API changes

* fix: clippy

Co-authored-by: CircleCI[bot] <circleci@influxdata.com>
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-07-28 08:10:47 +00:00
Marco Neumann d7ab7362fd
refactor: avoid schema copies in `select_schema` (#5214)
This massively helps with #5202.

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-07-27 08:30:26 +00:00
Marco Neumann 85c186f5b8
feat: cache projected chunk schemas in querier (#5213)
* feat: cache projected chunk schemas in querier

Ref #5202.

* refactor: simplify size calculations

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-07-27 08:23:20 +00:00
Andrew Lamb e2d871b00b
chore: Update datafusion and arrow/parquet/arrow-flight to `18.0.0` (#5079)
* chore: Update datafusion to 10.0.0, arrow/parquet/arrow-flight to 18

* chore: Run cargo hakari tasks

* fix: update cargo pin

Co-authored-by: CircleCI[bot] <circleci@influxdata.com>
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-07-18 15:01:03 +00:00
Marco Neumann b1b2cb5d4a
feat: load read buffer on demand (#5091)
* refactor: extract `select_schema`

* refactor: improve `InternalLostInputField` error message

* test: improve SQL runner output

* feat: load read buffer on demand

Closes #5032.

* refactor: move `[Half]OwnedSelection` to `schema` crate`
2022-07-13 08:51:40 +00:00
Andrew Lamb c46e1c6347
chore: Update datafusion + arrow/parquet/arrow-flight to `17.0.0` (#5021)
* fix: correct nullability declaration of system tables

* chore: Update datafusion and arrow/parquet/arrow-flight

* chore: Run cargo hakari tasks

* fix: Update tests

* fix: Update tests

* fix: predicate pruning

* fix: add some tests

* fix: query_functions

* fix: fix read_buffer test

* fix: fix clippy

Co-authored-by: CircleCI[bot] <circleci@influxdata.com>
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-07-07 19:22:15 +00:00
pierwill 54d3c1e69f
fix: Fix docs for `schema::Schema::is_empty` (#5011)
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-07-01 01:13:28 +00:00
dependabot[bot] d9ab157797
chore(deps): Bump indexmap from 1.8.2 to 1.9.0 (#4891)
* chore(deps): Bump indexmap from 1.8.2 to 1.9.0

Bumps [indexmap](https://github.com/bluss/indexmap) from 1.8.2 to 1.9.0.
- [Release notes](https://github.com/bluss/indexmap/releases)
- [Changelog](https://github.com/bluss/indexmap/blob/master/RELEASES.md)
- [Commits](https://github.com/bluss/indexmap/compare/1.8.2...1.9.0)

---
updated-dependencies:
- dependency-name: indexmap
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>

* chore: Run cargo hakari tasks

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: CircleCI[bot] <circleci@influxdata.com>
2022-06-17 07:42:36 +00:00
Nga Tran b682dbbc2e
chore: Add debug info of sort_key for ingester (#4859)
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-06-14 20:39:17 +00:00
Andrew Lamb e91d00b10c
chore: Update datafusion + `arrow`/`parquet`/`arrow-flight` to `16.0.0 (#4851)
* chore: TEMP Update DataFusion to pre-release

* chore: update arrow et al to 16.0.0

* chore: Run cargo hakari tasks

* fix: update reader read_dictionary API

* chore: Update to real Datafusion release

* fix: Update parquet API

* fix: update test

Co-authored-by: CircleCI[bot] <circleci@influxdata.com>
2022-06-14 16:31:40 +00:00
Andrew Lamb ddf61c5e98
refactor: Consolidate `Selection` creation, add tests (#4832)
* refactor: Consolidate Selection --> DataFusion projection

* fix: remove now unused function
2022-06-10 18:30:43 +00:00
Nga Tran 13c57d524a
feat: Change data type of catalog partition's sort_key from a string to an array of string (#4801)
* feat: Change data type of catalog Postgres partition's sort_key from a string to an array of string

* test: add column with comma

* fix: use new protonuf field to avoid incompactible

* fix: ensure sort_key is an empty array rather than NULL

* refactor: address review comments

* refactor: address more comments

* chore: clearer comments

* chore: Update iox_catalog/migrations/20220607102200_change_sort_key_type_to_array.sql

* chore: Update iox_catalog/migrations/20220607102200_change_sort_key_type_to_array.sql

* fix: Rename migration so it will be applied after

Co-authored-by: Marko Mikulicic <mkm@influxdata.com>
2022-06-10 13:31:31 +00:00
Andrew Lamb 3592aa52d8
chore: Update datafusion + `arrow`/`parquet`/`arrow-flight` to `15.0.0` (#4743)
* chore: Update datafusion + `arrow`/`parquet`/`arrow-flight` to `15.0.0`

* chore: Update APIs

* chore: Run cargo hakari tasks

* feat: normalize parquet file metadata

* chore: update size tests

* chore: add docs on metadata stripping

* chore: TEMP UPDATE TO DF BRANCH

* chore: Update for new API

* fix: Update to latest DF

* fix: cargo hakari

Co-authored-by: CircleCI[bot] <circleci@influxdata.com>
Co-authored-by: Raphael Taylor-Davies <r.taylordavies@googlemail.com>
2022-06-03 10:32:26 +00:00
Andrew Lamb 3a33e806c7
chore: Update datafusion + `arrow`/`parquet`/`arrow-flight` to `14.0.0` (#4619)
* chore: Update datafusion deps

* chore: update arrow/parquet/arrow flight deps

* chore: Run cargo hakari tasks

* chore: Update location of utils

* chore: Update some more APIs

Co-authored-by: CircleCI[bot] <circleci@influxdata.com>
2022-05-17 14:13:03 +00:00
Marco Neumann 779f0e9cdf
feat: querier RAM pool (#4593)
* feat: `SortKey::size`

* feat: `FunctionEstimator`

* feat: querier RAM pool

Let's put all the caches into a single RAM pool, so we can at least
somewhat control RAM usage. Note that this does NOT limit the peak
memory during query execution though, but should at least stop unlimited
cache growth. A follow-up PR will add metrics.

* refactor: improve some size calculations

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-05-17 13:11:20 +00:00
Andrew Lamb 02893e598c
chore: Update datafusion and upgrade arrow/parquet/arrow-flight to 13 (#4516)
* chore: Tool for automating arrow version update

* chore: Update datafusion and arrow/parquet/arrow-flight

* fix: update for changes in Arrow API

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-05-05 00:21:02 +00:00
Marco Neumann 468f576698
fix: do not prune all-NULL columns from sort keys (#4442) 2022-04-27 16:06:26 +00:00
Andrew Lamb 73bed810da
chore: Update arrow, arrow-flight, parquet, tonic, prost, etc (#4357)
* chore: Update datafusion

* chore: Update arrow/arrow-flight/parquet to 12

* chore: update datafusion correctly

* chore: Update prost, tonic, and dependents

* fix: Fixup some api changes

* fix: Update test output in db

* fix: Update test output in parquet_file

* fix: remove old pbjson types

* fix: Add "--experimental_allow_proto3_optional" flag

* chore: Run cargo hakari tasks

* fix: compile error

* chore: Update heappy

Co-authored-by: CircleCI[bot] <circleci@influxdata.com>
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-04-20 11:12:17 +00:00
Nga Tran 2a601c3099
fix: Revert "chore: Revert "fx: Revert "fix: Revert "feat: Use the sort key stored in the catalog during compaction" (#4299)" (#4303)" (#4327)" (#4328)
* fix: Revert "chore: Revert "fx: Revert "fix: Revert "feat: Use the sort key stored in the catalog during compaction" (#4299)" (#4303)" (#4327)"

This reverts commit 7e5d719027.

* chore: resolve merge conflict

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-04-18 15:27:39 +00:00
Nga Tran 7e5d719027
chore: Revert "fix: Revert "fix: Revert "feat: Use the sort key stored in the catalog during compaction" (#4299)" (#4303)" (#4327)
This reverts commit fe8d9948d5.
2022-04-14 17:11:55 +00:00
Carol (Nichols || Goulding) fe8d9948d5
fix: Revert "fix: Revert "feat: Use the sort key stored in the catalog during compaction" (#4299)" (#4303)
This reverts commit 7ddbf7c025.

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-04-14 15:42:28 +00:00
Carol (Nichols || Goulding) 7ddbf7c025
fix: Revert "feat: Use the sort key stored in the catalog during compaction" (#4299)
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-04-13 14:11:10 +00:00
Carol (Nichols || Goulding) d23d7b190f
fix: Filter compacted sort key to present columns
In parquet files written after compaction, use the catalog sort key but
filter it to only those columns that appear in the merged schema.

Panic if there are any columns in the merged schema's primary key that
aren't in the catalog sort key; that shouldn't happen.
2022-04-11 14:09:46 -04:00
Carol (Nichols || Goulding) 5a46bb972d
refactor: Extract a helper fn for creating Arrays in RecordBatches 2022-04-11 14:09:46 -04:00
Carol (Nichols || Goulding) 87e4a1a51d
refactor: Move ingester sort key to schema sort key
This logic isn't actually ingester specific
2022-04-11 14:09:45 -04:00
Carol (Nichols || Goulding) f0d5987317
feat: Update partition sort_key in catalog after persist
Connects to #4196.
2022-04-06 09:31:42 -04:00
Carol (Nichols || Goulding) c11fe5b226
refactor: Use the new contains method on SortKey 2022-04-06 09:31:42 -04:00
Carol (Nichols || Goulding) b16fcc284d
feat: Add new columns to the sort key during compaction
Connects to #4196.
2022-04-06 09:31:42 -04:00
dependabot[bot] 9950bcee27
chore(deps): Bump indexmap from 1.8.0 to 1.8.1 (#4166)
Bumps [indexmap](https://github.com/bluss/indexmap) from 1.8.0 to 1.8.1.
- [Release notes](https://github.com/bluss/indexmap/releases)
- [Changelog](https://github.com/bluss/indexmap/blob/master/RELEASES.md)
- [Commits](https://github.com/bluss/indexmap/compare/1.8.0...1.8.1)

---
updated-dependencies:
- dependency-name: indexmap
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2022-03-30 08:49:07 +00:00
Andrew Lamb 5c69a3f43b
chore: Update deps: datafusion, arrow/arrow-flight/parquet to 11, zstd to 0.11 (#4119)
* chore: update datafusion

* chore(deps): Bump arrow from 10.0.0 to 11.0.0

Bumps [arrow](https://github.com/apache/arrow-rs) from 10.0.0 to 11.0.0.
- [Release notes](https://github.com/apache/arrow-rs/releases)
- [Changelog](https://github.com/apache/arrow-rs/blob/master/CHANGELOG.md)
- [Commits](https://github.com/apache/arrow-rs/compare/10.0.0...11.0.0)

---
updated-dependencies:
- dependency-name: arrow
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>

* chore(deps): Bump arrow-flight from 10.0.0 to 11.0.0

Bumps [arrow-flight](https://github.com/apache/arrow-rs) from 10.0.0 to 11.0.0.
- [Release notes](https://github.com/apache/arrow-rs/releases)
- [Changelog](https://github.com/apache/arrow-rs/blob/master/CHANGELOG.md)
- [Commits](https://github.com/apache/arrow-rs/compare/10.0.0...11.0.0)

---
updated-dependencies:
- dependency-name: arrow-flight
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>

* chore: update parquet to 11.0.0

* fix: error on create schema, test for same

* fix: upgrade zstd

* chore: Run cargo hakari tasks

* fix: fix logical merge conflict

* fix: hakari

* fix: hakari

* fix: update newly introduced dep

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: CircleCI[bot] <circleci@influxdata.com>
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-03-24 15:27:36 +00:00
Andrew Lamb 2c3d30ca32
chore: Update datafusion, arrow, flight and parquet (#4000)
* chore: Update datafusion, arrow, flight and parquet

* fix: api change

* fix: fmt

* fix: update test metadata size

* fix: Update sizes in parquet test

* fix: more metadata size update
2022-03-10 12:24:47 +00:00
Edd Robinson 3d047073b9
feat: add tracing down to the chunk level (#3804)
* refactor: wire exectution context to Deduplicator

* feat: example trace to chunk read_filter

* refactor: make execution context required

* refactor: expose metadata API

* refactor: more span context for chunk read_filter

* refactor: fix build

* refactor: push context into result stream

* refactor: make executor optional
2022-03-02 19:08:22 +00:00
Raphael Taylor-Davies 2a842fbb1a
feat: correctly sort data and store in catalog metadata (#3864)
* feat: respect sort order in ChunkTableProvider (#3214)

feat: persist sort order in catalog (#3845)

refactor: owned SortKey (#3845)

* fix: size tests

* refactor: immutable SortKey

* test: test sort order restart (#3845)

* chore: explicit None for sort key

* chore: test cleanup

* fix: handling of sort keys containing fields

* chore: remove unused selected_sort_key

* chore: more docs

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-02-25 17:56:27 +00:00
dependabot[bot] 3b7d31c88a
chore(deps): Bump arrow from 9.0.2 to 9.1.0 (#3826)
Bumps [arrow](https://github.com/apache/arrow-rs) from 9.0.2 to 9.1.0.
- [Release notes](https://github.com/apache/arrow-rs/releases)
- [Changelog](https://github.com/apache/arrow-rs/blob/master/CHANGELOG.md)
- [Commits](https://github.com/apache/arrow-rs/compare/9.0.2...9.1.0)

---
updated-dependencies:
- dependency-name: arrow
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2022-02-23 09:25:46 +00:00
Andrew Lamb a30803e692
chore: Update datafusion, update `arrow`/`parquet`/`arrow-flight` to 9.0 (#3733)
* chore: Update datafusion

* chore: Update arrow

* fix: missing updates

* chore: Update cargo.lock

* fix: update for smaller parquet size

* fix: update test for smaller parquet files

* test: ensure parquet_file tests write multiple row groups

* fix: update callsite

* fix: Update for tests

* fix: harkari

* fix: use IoxObjectStore::existing

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-02-15 12:10:24 +00:00
Dom 32d7c4cbfe
refactor: remove InfluxColumnType::IOx (#3565)
* refactor: remove InfluxColumnType::IOx

Remove unused column variant - see #3554 for context.

* refactor: reserve SEMANTIC_TYPE_IOX name in proto

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-01-27 21:15:36 +00:00
Andrew Lamb 2062267d0f
chore: Update hashbrown (#3551)
* chore: Update hashbrown

* fix: hakari

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-01-27 15:34:10 +00:00
Andrew Lamb 5488c257d1
chore: Update datafusion, upgrade to arrow/parqet/arrow-flight 8.0.0 (#3517)
* chore: Update datafusion

* chore: update to arrow 8

* fix: update to use new DataFusion APIs

* fix: update case for sortedness

* fix: cargo hakari
2022-01-27 13:33:27 +00:00
Nga Tran 52866fe6a9
fix: merge record batches into one batch (#3535)
* fix: merge record batches into one batch

refactor: address review comments

* chore: update test output
2022-01-25 23:29:16 +00:00
Andrew Lamb dd23056efd
chore: update datafusion, arrow, prost, tonic, pbjson, etc (#3455)
* chore: update datafusion, arrow, prost, tonic, etc

* fix: update pprof as well

* chore: update hakari

* fix: update pbjson

* chore: update heappy

* fix: hakari

* fix: workaround https://github.com/influxdata/influxdb_iox/issues/3458

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-01-13 17:07:15 +00:00
Marco Neumann f3f6f335a9
chore: upgrade to snafu 0.7 (#3440) 2022-01-11 19:22:36 +00:00
Carol (Nichols || Goulding) 39a7077cd9
fix: Turn on std for indexmap to avoid a build-time target check
Connects to #3117.
2021-12-06 09:37:14 -05:00
Carol (Nichols || Goulding) 9fd4a560f5
feat: Results of running cargo hakari manage-deps 2021-11-19 09:21:57 -05:00