Commit Graph

1104 Commits (8fda621d8b41b383e0c9895fdab77809285fdf34)

Author SHA1 Message Date
Jason Wilder 8082fc61ba Fix parsing keys when loading database index
The code for parsing a key our of the WAL or TSM files in the engine
was naive and didn't account for measurements with escape chars. This
uses the correct parsing code to parse and load them correctly.

Fixes #6496
2016-04-30 14:47:19 -06:00
Todd Persen 9eb4c1ec57 Fix typo in comment. 2016-04-29 16:26:27 -07:00
Jason Wilder abcb559b09 Remove index meta data when series and measurements are gone
This remove the dropMeta param from the tsdb.Store.DeleteSeries and
lets the shard determine when to remove the meta data from the index
based on what series still have data in the shard.

This uncovered a nasty bug in compactions where a fully deleted series would
prematurely end the compactions and not carry forward the rest of the data
in the TSM file.  This is now fixed as well.
2016-04-29 16:31:57 -06:00
Edd Robinson 4d1cfa887c Ensure measurement dropped when no more series 2016-04-29 00:05:42 +01:00
Jason Wilder 2bd5880d7a Remove series from index when shard is closed
When a shard is closed and removed due to retention policy enforcement,
the series contained in the shard would still exists in the index causing
a memory leak.  Restarting the server would cause them not to be loaded.

Fixes #6457
2016-04-28 12:34:46 -06:00
Jason Wilder 4e353867d5 Fix first block not getting purged when deleting series 2016-04-27 17:08:00 -06:00
Ben Johnson f7af787aef
add DELETE query support
This commit adds query language support for deleting series with a
`DELETE` query.
2016-04-27 15:16:23 -06:00
Jason Wilder aefd2ad08b Add DeleteSeries and DeleteSeriesRange 2016-04-27 13:09:53 -06:00
Jason Wilder c306090361 Fix tombstone rename on windows 2016-04-27 13:09:53 -06:00
Jason Wilder 86d37614e4 Remove debugging from test output 2016-04-27 13:09:53 -06:00
Jason Wilder bf3aa5857d Don't add tombstone for timerange not contained by file 2016-04-27 13:09:53 -06:00
Jason Wilder 6042e114a1 Remove tombstoned values during compaction
This will skip blocks that are fully tombstoned as well as remove
points that have been removed within a block.
2016-04-27 13:09:53 -06:00
Jason Wilder 23bbfb2192 Prevent truncated WAL entries from panicing 2016-04-27 13:09:53 -06:00
Jason Wilder 0de21ade40 Add delete range of values support to WAL and cache loader 2016-04-27 13:09:53 -06:00
Jason Wilder d13d01b516 Allow deleting series by time on a shard 2016-04-27 13:09:53 -06:00
Jason Wilder 4d71d2b01f Add support for deleting cache values using time range 2016-04-27 13:09:52 -06:00
Jason Wilder c154cd4b4a Remove TSMReaderOptions
Not used
2016-04-27 13:09:52 -06:00
Jason Wilder c8bd41c2d8 Remove TSM reader Keys func
It's very inneficient and should never be used.
2016-04-27 13:09:52 -06:00
Jason Wilder 7e06d558d5 Update ContainsValue to handle tombstones 2016-04-27 13:09:52 -06:00
Jason Wilder 97504a552c Support time range tombstones in FileStore/KeyCursor 2016-04-27 13:09:52 -06:00
Jason Wilder 27c2bc3f15 Sepearate IndexWriter from TSMIndex
Allows for future versionion of the TSMIndex as well as removing
a lot of unnecessary code.
2016-04-27 13:09:52 -06:00
Jason Wilder bb82331db7 Move TSMIndex defn to reader.go 2016-04-27 13:09:52 -06:00
Jason Wilder 1ac0b01c5a Remove fileAccessor
No longer used
2016-04-27 13:09:52 -06:00
Jason Wilder a789e819a3 Remove NewTSMReaderWithOptions
There are two TSMIndex implementations, the directIndex and the
indirectIndex.  Originally, we only had the directIndex and later
added the indirectIndex and NewTSMReaderWithOptions in order to
allow both indexes to be used in tests and code.  This has created
a problem since we really only use the directIndex for writing and
always use the indirectIndex for reading.

This changes removes the NewTSMReaderWithOptions func so that it is
no longer possible to create a TSMReader with a directIndex.  This
will allow a lot of the block reading code used by the directIndex
to be removed and simplify maintainence.  It also gives better test
coverage of the code that is actually used by the TSM engine now.
2016-04-27 13:09:52 -06:00
Jason Wilder bc6328d196 Add time range support to tombstone files
This adds support for a time range to tombstone files to allow a subset
of points to be deleted instead of the whole series.  It changes the
tombstone file format to a binary format and maintains backwards compatibility
with the old text format tombstone files.
2016-04-27 13:09:52 -06:00
Tait Clarridge df0e16a92f Add safer unlock to CreateFieldIfNotExists
A deadlock can occur if the field was created while we were waiting for the lock.
2016-04-25 12:44:58 -04:00
Ben Johnson 9c1fa76f3c Merge pull request #6452 from benbjohnson/simple8b
update dep: simple8b @ b421ab40
2016-04-22 11:05:42 -06:00
Ben Johnson 286072f65a
update dep: simple8b @ b421ab40 2016-04-22 09:46:05 -06:00
Jonathan A. Sternberg d26e4e3650 Pass binary expressions to the underlying query
Binary math inside of a where condition was previously disallowed. Now,
these types of queries are just passed verbatim down to the underlying
query engine which can handle it.

We may want to revisit this when it comes to tags at some point as it
prevents the more efficient filtering of tags that a simple expression
allows, but it allows a query like this to be done:

    SELECT * FROM cpu WHERE value + 2 < 5

So while it can be better, this is a good initial implementation to
provide this functionality. There are very rare situations where a tag
may be used appropriately in one of these circumstances.

Fixes #3558.
2016-04-22 11:30:36 -04:00
Ben Johnson d204a8b683
optimize tsm1.FloatDecoder
This commit changes the `FloatDecoder.val` from a `float64` type
to a `uint64` to avoid an additional type conversion during read.
Now the type gets converted to a `float64` only on call to `Values()`.
2016-04-21 08:49:12 -06:00
Jason Wilder 87ceb7426a Don't lock the cache while adding entries
Entries have their own locking so the cache doesn't need to be lock
when adding to them.
2016-04-20 16:08:58 -06:00
Jason Wilder 89aeaafd50 Re-use the string point key 2016-04-20 16:08:58 -06:00
Jason Wilder fbaa7db54f Don't lock entry when scanning new values to add 2016-04-20 16:00:26 -06:00
Jason Wilder bfa225f149 Merge pull request #6430 from influxdata/jw-cache-load-size
Disable cache max memory size when reloading the cache
2016-04-20 14:35:23 -06:00
Stephen Gutekanst 9dc09c5257 Make logging output location more programmatically configurable (#6213)
This has various benefits:

- Users embedding InfluxDB within other Go programs can specify a different logger / prefix easily.
- More consistent with code used elsewhere in InfluxDB (e.g. services, other `run.Server.*` fields, etc).
- This is also more efficient, because it means `executeQuery` no longer allocates a single `*log.Logger` each time it is called.
2016-04-20 21:07:08 +01:00
Jason Wilder f679787080 Disable cache max memory size when reloading the cache
The cache max memory size is an approximate size and can prevent a
shard from loading at startup.  This change disable the max size
at startup to prevent this problem and sets the limt back after
reloading.

Fixes #6109
2016-04-20 10:41:30 -06:00
Jonathan A. Sternberg c8c38e15cd Merge pull request #6386 from influxdata/js-iterator-next-error
Modify all of the iterators to allow returning an error on Next()
2016-04-20 10:39:53 -04:00
Ben Johnson 54454e1e5b Merge pull request #6424 from benbjohnson/optimize-bit-reader
Optimize tsm1.BitReader
2016-04-20 08:28:24 -06:00
Seif Lotfy c6e3c87e00 Add Block checksum validation and "influx_inspect verify" tool
Fixes #5502
2016-04-19 22:33:03 +02:00
Jonathan A. Sternberg 493ef0e1ce Merge pull request #6416 from influxdata/js-3166-deterministic-limit
Sort the series keys inside of a tag set so the output is deterministic
2016-04-19 14:49:49 -04:00
Ben Johnson 1d2238c642
optimize tsm1.BitReader
This commit rewrites the `tsm1.BitReader` to use an 8-byte buffer
instead of a 1-byte buffer and provide an inlineable fast bit read.
2016-04-19 11:34:17 -06:00
Jason Wilder f841a90d35 Use int64 instead of time.Time in timestamp encoder/decoder 2016-04-19 10:25:27 -06:00
Jason Wilder 61beeca426 Update timestamp benchmarks 2016-04-19 10:17:32 -06:00
Jonathan A. Sternberg 09c46a451a Sort the series keys inside of a tag set so the output is deterministic
The series keys within a tag set were previously not sorted which would
cause the output to be non-deterministic. This sorts the output series
by their keys so it has a consistent output especially when using
limits.

Fixes #3166.
2016-04-18 17:45:31 -04:00
Jonathan A. Sternberg 7ec2a991d5 Modify all of the iterators to allow returning an error on Next()
This also switches the remaining iterators to be lazy so they can return
errors properly. They needed to be converted to lazy initialization
anyway, which has the side effect of making it much easier for us to
propagate the underlying error during initialization.

Updated the Emitter to return errors when it cannot read properly from
the iterators.
2016-04-18 11:17:55 -04:00
Jonathan A. Sternberg 93745d9693 Merge pull request #6391 from influxdata/js-5553-limit-queries-slow-with-group-by
Propagate the limit option to the low level iterators
2016-04-16 09:39:25 -04:00
Jonathan A. Sternberg bd5fdd797d Propagate the limit option to the low level iterators
When a GROUP BY or multiple sources are used, the top level limit
iterator requires reading the entire iterator stream so it can find all
of the tag groups it needs to return. For large data series, this ends
up with the limit iterator discarding a lot of output.

This change adds a new lower level limit iterator on each series itself
so that there are fewer data points that have to be thrown away by the
top level iterator.

Fixes #5553.
2016-04-15 18:23:54 -04:00
Jonathan A. Sternberg 835d08591e Do not filter out empty tags from series keys 2016-04-13 09:15:57 -04:00
Jonathan A. Sternberg 60282cf52d Merge pull request #6284 from influxdata/js-3371-where-clause-compare-tags-and-fields
Enhance comparing tags and fields in the where clause
2016-04-12 11:45:54 -04:00
Pierre Fersing 29b19a2293 Fix deadlock in tsm1/file_store 2016-04-12 09:39:21 +02:00
Jonathan A. Sternberg ea6262b712 Enhance comparing tags and fields in the where clause
Now it is possible to compare tags and fields and it is also now
possible to compare tags and tags. Previously, it was only possible to
compare fields with fields and tags with a string or a regex.

Fixes #3371.
2016-04-11 18:10:08 -04:00
Ben Johnson 525e22c92b
tsm1 query engine alloc reduction
This commit makes a number of performance improvements to
reduce allocations during query execution. Several objects
and buffers are now reused across the components to avoid
allocations.

Previously a simple `count(value)` query across 1M points
would require 26,000+ allocations. After the changes in
this commit that number has been reduced to 88.
2016-04-11 14:50:59 -06:00
Jonathan A. Sternberg 5bdd61bde7 Support empty tags for all WHERE equality operations
A missing tag on a point was sometimes treated as `""` and sometimes
treated as a separate `null` entity. This change modifies the equality
operations to always treat a missing tag as an empty string.

Empty tags are *not* indexed and do not have the same performance as a
tag that exists.

Fixes #3773.
2016-04-11 12:01:35 -04:00
Edd Robinson 5327a75a6f Merge pull request #6216 from influxdata/er-scope-proto
Change protobuf package names to avoid clashes
2016-04-07 16:38:21 +01:00
Jonathan A. Sternberg a58430bb60 Merge pull request #6217 from influxdata/js-tsdb-unused-code
Remove unused code and increase some test coverage for the tsdb package
2016-04-06 10:07:43 -04:00
Jonathan A. Sternberg 028fdaff81 Merge pull request #6222 from influxdata/js-6206-descending-tsm1-iterators
Handle nil values from the tsm1 cursor correctly
2016-04-06 10:05:20 -04:00
Jonathan A. Sternberg 94ec92d669 Handle nil values from the tsm1 cursor correctly
Send nil values from the tsm1 cursor at the end of the cursor. After the
cursor reached tsm1, the `nextAt()` call would always return the default
value rather than a nil value.

Descending also didn't work correctly because the seeking functionality
for tsm1 iterators would always act like they were ascending instead of
descending when choosing which value to select. This resulted in very
strange output from the emitter since it couldn't figure out if it was
ascending or descending.

Fixes #6206.
2016-04-06 09:27:02 -04:00
Jonathan A. Sternberg 7a229c7e4e Remove unused code and increase some test coverage for the tsdb package 2016-04-06 09:24:56 -04:00
joelegasse 84f8dd7c85 Merge pull request #6190 from influxdata/jw-race
Fix race on measurementFields
2016-04-06 08:13:58 -04:00
Edd Robinson 184257a10d Scope all internal protobuf packages 2016-04-05 13:54:21 +01:00
Jonathan A. Sternberg 37b63cedec Cleanup QueryExecutor and split statement execution code
The QueryExecutor had a lot of dead code made obsolete by the query
engine refactor that has now been removed. The TSDBStore interface has
also been cleaned up so we can have multiple implementations of this
(such as a local and remote version).

A StatementExecutor interface has been created for adding custom
functionality to the QueryExecutor that may not be available in the open
source version. The QueryExecutor delegate all statement execution to
the StatementExecutor and the QueryExecutor will only keep track of
housekeeping. Implementing additional queries is as simple as wrapping
the cluster.StatementExecutor struct or replacing it with something
completely different.

The PointsWriter in the QueryExecutor has been changed to a simple
interface that implements the one method needed by the query executor.
This is to allow different PointsWriter implementations to be used by
the QueryExecutor. It has also been moved into the StatementExecutor
instead.

The TSDBStore interface has now been modified to contain the code for
creating an IteratorCreator. This is so the underlying TSDBStore can
implement different ways of accessing the underlying shards rather than
always having to access each shard individually (such as batch
requests).

Remove the show servers handling. This isn't a valid command in the open
source version of InfluxDB anymore.

The QueryManager interface is now built into QueryExecutor and is no
longer necessary. The StatementExecutor and QueryExecutor split allows
task management to much more easily be built into QueryExecutor rather
than as a separate struct.
2016-04-04 13:27:17 -04:00
Jason Wilder ca8b0ca143 Optimize locking in CreateFieldIfNotExists
Also remove some dead code that is no longer relevant with tsm.
2016-04-01 20:44:40 -06:00
Jason Wilder 3f4c5a5585 Fix race on measurementFields
Both Shard and Engine had the same reference to the measurementField map,
but they each protected it with their own locks.  This causes a race when
write and queries are occurring because writes can add new fields to the
map while queries are reading from it.

The fix moves the ownership to the Engine and provides protected accessors
to that Shard now users.  For the most parts, the access on shard were old
dead code.

Fixing the measurementFields map race created a new race on the internal
fields map.  This is now unexported and protected via MeasurementFields
exported funcs.

Fixes #6188
2016-04-01 18:57:01 -06:00
Jason Wilder 07e3215d11 Remove ununsed Series.match func 2016-03-31 10:19:46 -06:00
Jason Wilder 40c4973423 Remove per measurement stats collection
The stats setup ends up creating a lot of lock contention which signifcantly
impacts write throughput when a large number of measurements are used.

Fixes #6131
2016-03-31 10:19:27 -06:00
Jason Wilder f1bb87d4f8 Convert index write lock to series lock 2016-03-31 10:19:27 -06:00
Edd Robinson 8e2d1e48c7 Check if engine closed. Fixes #6140 2016-03-31 15:59:04 +01:00
Edd Robinson 75a2218fa1 Ensure syncronised access to engine 2016-03-31 15:58:19 +01:00
Jason Wilder 873ac2715d Fix panic: runtime error: slice bounds out of range
Writing a key that exceeds the max key length could cause a panic
when reading a tsm file because the 2 bytes used for the key length
would not be enough to represent the actual key length.

The writer will now return an error if when trying to write a key
that is too large.
2016-03-30 23:44:17 -06:00
Jonathan A. Sternberg 711a6614e6 Implement the point limit monitor
Fixes #6077.
2016-03-30 16:08:56 -04:00
Joe LeGasse f10c300765 Update to conversion tool to work in current versions
After adding type-switches to the tsm1 packages, the custom
implementation found in the conversion tool broke. This change uses
tsm1.NewValue() instead of a custom implementation.

This change also ensures that the tsm1.Value interface can only be
implemented internally to allow for the optimized type-switch based
encoding
2016-03-30 13:26:46 -04:00
Jason Wilder 9f41acba2f Move shard mapping logic into index 2016-03-29 12:59:27 -06:00
Jason Wilder 60c3898577 Add godoc for KeyAt func 2016-03-29 12:59:26 -06:00
Jason Wilder 1b08e2dd55 Use walk func to load all tsm keys to index
Avoids allocating a big map or all keys.
2016-03-29 12:59:26 -06:00
Jason Wilder 96e076b6df Limit how many shards are loaded concurrently
Since loading a shard can allocate a lot of memory, running them all
at once could OOM the process.  This limits the number of shards
loaded to 4.  This will be changed to a config option provided the
approach helps.
2016-03-29 12:59:26 -06:00
Jason Wilder d4757ad040 Remove sync.Pool from wal UnmarshalBinary
When loading many shards concurrently they block trying to
acquire a write lock in the sync pool adding a new source of
contention.  Since this code flow always needs to allocate a
buffer it's not really buying us much.
2016-03-29 12:59:26 -06:00
Jason Wilder 3f0e871425 Reduce lock content when loading database index 2016-03-29 12:59:26 -06:00
Jason Wilder 03ced4cc90 Load shards concurrently 2016-03-29 12:58:52 -06:00
Ben Johnson 45f1c28adb add tsm iterator stats buffer
This commit adds a buffer for stats to be updated without
requiring a mutex lock/unlock on every point. The tradeoff
is that stats are not exactly precise. This works for our
use case because stats are only periodically checked.
2016-03-23 12:23:22 -06:00
Jonathan A. Sternberg a35d9602cd Fix where filters when a OR is used and when a tag does not exist
If an OR was used, merging filters between different expressions would
not work correctly. If one of the sides had a set of series ids with a
condition and the other side had no series ids associated with the
expression, all of the series from the side with a condition would have
the condition ignored. Instead of defaulting a non-existant series
filter to true, it should just be false and the evaluation of the one
side that does exist should take care of determining if the series id
should be included or not. The AND condition used false correctly so did
not have to be changed.

If a tag did not exist and `!=` or `!~` were used, it would return false
even though the neither a field or a tag equaled those values. This has
now been modified to correctly return the correct series ids and the
correct condition.

Also fixed a panic that would occur when a tag caused a field access to
become unnecessary. The filter using the field access still got created
and used even though it was unnecessary, resulting in an attempted
access to a non-initialized map.

Fixes #5152 and a bunch of other miscellaneous issues.
2016-03-22 12:19:06 -04:00
Ben Johnson 573dd0f96a Merge pull request #6035 from benbjohnson/query-engine-reduce-alloc
Reduce allocations in query execution
2016-03-22 10:11:14 -06:00
Ben Johnson 6e1c1da25b reduce allocations in query execution
This commit removes some heap objects by converting them from
pointer references to non-pointers or by reusing buffers.
2016-03-22 09:51:39 -06:00
Jason Wilder 7857e07a1e Merge pull request #6062 from influxdata/mr-prune-wal-config
Remove unused WAL configuration variables/fields
2016-03-22 09:20:27 -06:00
Jonathan A. Sternberg ad96207868 Fix ORDER BY desc so it doesn't skip values
After reading the initial buffer, ORDER BY desc would read the next
block into the buffer and only read the first element. It's because the
code that was copied from the ascending cursor wasn't modified correctly
to set the position to the last element in the buffer.

The buffer size has also been lowered from 1000 to 10 to match with the
ascending cursor for performance with limit queries.

Fixes #6055.
2016-03-22 09:40:11 -04:00
Ben Johnson 7156c1f9bd add IteratorStats
This commit adds an `IteratorStats` that holds aggregate
iterator processing information. A method is also added to
`Iterator` to return the stats:

	Stats() influxql.IteratorStats

The remote iterators will also emit their stats in the point
stream upon first connection, on a given interval, and then
finally once the last point has been sent.
2016-03-21 16:25:19 -06:00
Jason Wilder ee2f21e76f Merge pull request #6082 from influxdata/jw-tsm
Fix partially written TSM files
2016-03-21 15:42:27 -06:00
Jason Wilder 7567453c9a Ensure TSM files are fsync'd
Make sure TSM files are fsync'd when closed and also that the parent
dir is fsync'd when they are renamed.
2016-03-21 15:03:52 -06:00
Jason Wilder a4e5446ddd Return error when TSM writer close returns one
The TSM writer uses a bufio.Writer that needs to be flushed before
it's closed.  If the flush fails for some reason, the error is not
handled by the defer and the compactor continues on as if all is good.
This can create files with truncated indexes or zero-length TSM files.

Fixes #5889
2016-03-21 15:00:36 -06:00
Jonathan A. Sternberg 6655ca7769 Create a new interrupt iterator that will stop emitting points after an interrupt
Use of the iterator is spread out into both `IteratorCreators` and
inside of the iterators themselves. Part of the interrupt must be
handled inside of the engine so it stops trying to emit points when an
interrupt is found and another part of the interrupt has to happen when
combining the iterators so it doesn't just start reading the next shard.
2016-03-21 12:07:07 -04:00
Mark Rushakoff 7a2adfcc5d Remove unused WAL configuration variables/fields
These were all b1/bz1 settings that no longer have any effect:

- {Default,}MaxWALSize
- {Default,}WALFlushInterval
- {Default,}WALPartitionFlushDelay
- {Default,WAL}ReadySeriesSize
- {Default,WAL}CompactionThreshold
- {Default,WAL}MaxSeriesSize
- {Default,WAL}FlushColdInterval
- {Default,WAL}PartitionSizeThreshold
2016-03-20 13:16:52 -07:00
Jonathan A. Sternberg d75428f79f Rename the special condition "name" to "_name" to reduce conflicts
Fixes #6034.
2016-03-16 17:17:04 -04:00
Jonathan A. Sternberg eb2d49dbe4 Merge pull request #6007 from benbjohnson/explicit-system-names
Allow querying of system-like series
2016-03-15 16:15:17 -04:00
Cory LaNou ba6a95e9bc Merge pull request #5994 from influxdata/single-server-lite
Single Server
2016-03-14 16:11:37 -05:00
Ben Johnson f692621ef5 allow querying of system-like series
Internal system series start with an underscore prefix but
restricting this prevents users who already use an underscore
prefix in their series names.

Fixes #5870
2016-03-14 13:50:52 -06:00
Jason Wilder 3fd40d48a1 Merge pull request #6006 from influxdata/jw-deadlock
Fix deadlock when running backup
2016-03-14 13:36:45 -06:00
Jason Wilder 9984cd5d6d Fix skipping blocks at query time when overlaps exist
Depending on how data is written across TSM files, it was possible
to skip over some blocks at query time making it looks like data was missing.
2016-03-14 13:11:11 -06:00
Jason Wilder 000459e350 Fix deadlock when running backup
A deadlock occurs under write load if a backup is run in between the
time when a snapshot compactions has snapshotted the cache and successfully
written it to disk.  The issus is that the second snapshot call will block
on the commit lock while it is holding the engine write lock.  This causes
all writes to block as well as prevents the currently runnign snapshot
compaction from completing because it needs to acquire a read-lock.

This PR removes the commit lock and just returns an error if a snapshot is
in progress to all any locks being held to be released.  The caller can determine
whether to retry or giveup.
2016-03-14 12:36:48 -06:00
Cory LaNou 27cfaa4b7a in memory meta, single node configs, etc. 2016-03-14 16:55:54 +00:00
Joe LeGasse 344e5abd41 Changed type-switch a few places to reduce allocations.
Slices of tsm1.Value interfaces are only ever used with all the same
types, and the previous code would switch on the type returned from a
call to Value(), which allocated and returned an interface{} object for
the underlying value.

This change instead type-switches on the tsm1.Value object itself,
allowing it direct access to the underlying value field, eliminating the
unecessary allocations.
2016-03-11 15:57:05 -05:00
Ben Johnson beda072426 add support for remote expansion of regex
This commit moves the `tsdb.Store.ExpandSources()` function onto
the `influxql.IteratorCreator` and provides support for issuing
source expansion across a cluster.
2016-03-11 12:40:07 -07:00