Commit Graph

337 Commits (37c65fc24f2170a8a187cd62d66f1122c0b7b099)

Author SHA1 Message Date
kodiakhq[bot] d0965bb0b2
Merge branch 'main' into dom/mb-partitioning 2022-02-16 11:30:42 +00:00
Paul Dix f542045485
feat: wire up persistence in ingester (#3685)
This adds persistence into the ingester with a lifecycle manager. The persist operation must still be updated to keep track of the min_unpersisted_sequence_number for each sequencer.
2022-02-16 00:13:40 +00:00
Edd Robinson 7ac9e216c4 refactor: use same log message 2022-02-15 14:36:55 +00:00
Edd Robinson 8a5ea29190 refactor: add measurement to log 2022-02-15 14:31:26 +00:00
Marco Neumann 44ee0166a0
fix: start Kafka write buffer stream at "earliest" offset, not at "0" (#3748) 2022-02-15 13:36:59 +00:00
Marco Neumann 9e7a27b344
fix: default Kafka topic name is `iox-shared` (#3747)
Do NOT use underscores in the Kafka topic because this is not supported
by Kafka. This was initially fixed by #3555 but reverted by #3623.
2022-02-15 12:34:46 +00:00
Andrew Lamb a30803e692
chore: Update datafusion, update `arrow`/`parquet`/`arrow-flight` to 9.0 (#3733)
* chore: Update datafusion

* chore: Update arrow

* fix: missing updates

* chore: Update cargo.lock

* fix: update for smaller parquet size

* fix: update test for smaller parquet files

* test: ensure parquet_file tests write multiple row groups

* fix: update callsite

* fix: Update for tests

* fix: harkari

* fix: use IoxObjectStore::existing

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-02-15 12:10:24 +00:00
Dom Dwyer e055800039 refactor: enable Partitioner in request pipeline
Adds the Partitioner DML handler into the handler stack, modifying the
input types of down-stream handlers to accept the partitioned data.
2022-02-15 11:34:33 +00:00
dependabot[bot] 89105ccfab
chore(deps): Bump tokio-util from 0.6.9 to 0.7.0 (#3743)
Bumps [tokio-util](https://github.com/tokio-rs/tokio) from 0.6.9 to 0.7.0.
- [Release notes](https://github.com/tokio-rs/tokio/releases)
- [Commits](https://github.com/tokio-rs/tokio/commits)

---
updated-dependencies:
- dependency-name: tokio-util
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2022-02-15 11:33:41 +00:00
Dom Dwyer e99922d518 refactor: parametrise DML handler input type
Allow a DML handler to specify the write input type on which it
operates.

This allows us to construct a write handler pipeline that transforms the
request as it passes through the various handlers. We'll use this to
implement a handler that annotates a normal set of table writes with the
partition key, modifying downstream handlers to expect this annotated
input.
2022-02-15 11:23:45 +00:00
Marco Neumann c6e374a025
feat: allow catalog access w/o a transaction (#3735)
* feat: allow catalog access w/o a transaction

Now the caller has the full control if they want to use a transaction or
not.

* fix: remove non-transaction-safe `create_many`

* fix: remove unnecessary transactions
2022-02-15 10:15:36 +00:00
dependabot[bot] 60a7f87645
chore(deps): Bump serde_json from 1.0.78 to 1.0.79 (#3739)
Bumps [serde_json](https://github.com/serde-rs/json) from 1.0.78 to 1.0.79.
- [Release notes](https://github.com/serde-rs/json/releases)
- [Commits](https://github.com/serde-rs/json/compare/v1.0.78...v1.0.79)

---
updated-dependencies:
- dependency-name: serde_json
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-02-14 20:42:54 +00:00
Raphael Taylor-Davies 26fd5273f0
feat: static database configuration (#2436) (#3732)
* feat: static database configuration (#2436)

* chore: fmt

* feat: don't base64 encode UUIDs in ServerConfigFile

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-02-14 19:42:49 +00:00
Raphael Taylor-Davies c79050254f
refactor: traitify database configuration (#2436) (#3730)
* refactor: traitify database configuration (#2436)

* chore: review feedback

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-02-13 09:26:44 +00:00
Raphael Taylor-Davies 866777ecd2
feat: static router configuration (#2436) (#3725)
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-02-11 14:09:37 +00:00
Raphael Taylor-Davies 4e3f66ed07
feat: CLI and gRPC APIs for shutting down and restarting databases (#3720)
* feat: allow catalog wipe and rebuild whilst shutdown

* feat: CLI and gRPC APIs for shutting down and restarting databases

* feat: add ability to skip replay on restart

* fix: test_wipe_persisted_catalog_error_db_exists

* fix: wipe_preserved_catalog
2022-02-11 10:14:43 +00:00
Raphael Taylor-Davies 910f381355
refactor: require UUID to create Database (#3715)
* refactor: require UUID to create Database

* chore: review feedback

* chore: fmt

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-02-10 20:04:06 +00:00
Raphael Taylor-Davies b1190262b7
feat: restartable `Database` (#3368) (#3711)
* feat: restartable `Database` (#3368)

* chore: fmt

* fix: wipe_preserved_catalog

* chore: review feedback

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-02-10 18:32:05 +00:00
Andrew Lamb d9f331ba2a
chore: update datafusion, stop repartitioning so aggressively (#3633)
* chore: update datafusion

* fix: Update to use new datafusion api

* chore: update expected plans

* fix: support zero output partitions

* fix: update test

* fix: Update for new DataFusion API

* fix: newly added system table

* fix: update cargo lock
2022-02-09 19:53:41 +00:00
Carol (Nichols || Goulding) 73828323ac
feat: Ingester Flight gRPC API (#3623)
* feat: Add a way to run ingester with an in-memory catalog from the CLI

If you set the --catalog-dsn string to "mem", rather than using that as
a Postgres connection URL, create an in-memory catalog.

Planning on using this in tests, so not documenting.

* fix: Set default topic to the same value as SHARED_KAFKA_TOPIC

Namely, both should use an underscore. I don't think there's a way to
directly share these values between a constant and an annotation.

* feat: Add a flight API (handshake only) to ingester

* fix: Create partitions if using file-based write buffer

* fix: Change the server fixture to handle ingester server type

For now, the ingester doesn't implement the deployment API. Not sure if
it should or not.

* feat: Start implementing ingester do_get, namely decoding the query

Skip serialization of the predicate for the moment.

* refactor: Rename ingest protos to ingester to match crate name

* refactor: Rename QueryResults to QueryData

* feat: Move ingester flight client to new querier crate

* fix: Off by one error, different starting indexes in sequencers

* fix: Create new CLI argument to pick the catalog type

* fix: Create a CLI option to set the number of topics to auto-create in the write buffer

* fix: Check the arrow flight service's health to tell that the ingester gRPC is up

* fix: Set postgres as the default catalog type

* fix: Return an error rather than panicking if CLI args aren't right
2022-02-09 19:07:44 +00:00
Edd Robinson 2334e779eb feat: implement read_window_aggregate sub-command 2022-02-09 12:32:48 +00:00
Edd Robinson 0774e1d328 feat: add read_window_aggregate request builder 2022-02-09 12:32:48 +00:00
Marco Neumann 4bddab56e2
feat: create new sequencers in ingester on demand (#3671)
There is no need to introduce yet another admin action to do that. If
the sequencer does not exist yet, we can just create it and set the
`min_unpersisted_sequence_number` to 0 (which is done be `create_or_get`).
2022-02-09 12:26:30 +00:00
Edd Robinson dfa6fd8579 feat: add quiet option to storage 2022-02-08 21:27:29 +00:00
Edd Robinson 11855a5eff feat: add format flag 2022-02-08 21:15:07 +00:00
Edd Robinson c175ccd1b4
feat: make stop/stop/predicate global (#3681) 2022-02-08 20:06:47 +00:00
kodiakhq[bot] ace76cef14
Merge branch 'main' into dom/sharded-cache 2022-02-08 16:09:48 +00:00
Paul Dix 59b2141c0b
feat: Add lifecycle manager to ingester (#3645)
This adds the lifecycle manager to the ingester. It will trigger based on a threshold for max partition size or age or based on keeping total memory under a certain threshold.

It defines a new interface for a persister, which is stubbed out for IngesterData. I'm not sure yet how persistence errors should be handled. The assumption here is that the persister continues to retry persistence forever until it succeeds.

There is one scenario I can think of that may cause this lifecycle manager problems. If a single partition is very high throughput, it could cause things to back up as persistence is not parallelized within a single partition. Any given partition can currently only run one persistence operation at a time. We can address this later.

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-02-08 15:23:40 +00:00
Marco Neumann 5de4d6203f
refactor: catalog transaction (#3660)
* refactor: catalog Unit of Work (= transaction)

Setup an inteface to handle Units of Work within our catalog. Previously
both the Postgres and the in-mem backend used "mini-transactions on
demand". Now the caller has a clear way to establish boundaries and
gets read and write isolation. A single `Arc<dyn Catalog>` can create as
many `Box<dyn UnitOfWork>` as you like, but note that depending on the
backend you may not scale infinitely (postgres will likely impose
certain limits and the in-mem backend limits concurrency to 1 to keep
things simple).

* docs: improve wording

Co-authored-by: Andrew Lamb <andrew@nerdnetworks.org>

* refactor: rename Unit of Work to Transaction

* test: improve `test_txn_isolation`

* feat: clearify transaction drop semantics

Co-authored-by: Andrew Lamb <andrew@nerdnetworks.org>
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-02-08 13:38:33 +00:00
kodiakhq[bot] 4567800901
Merge branch 'main' into er/feat/tag_values_cli 2022-02-08 13:07:59 +00:00
Raphael Taylor-Davies be662ec731
feat: lazy query log! (#3654)
* feat: lazy query log

* chore: fmt

* chore: review feedback

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-02-08 13:07:28 +00:00
Edd Robinson 6c10e1e901 feat: support _measurement/_field tag keys 2022-02-08 11:32:28 +00:00
Edd Robinson eb733042ca feat: add support for tag_values cli 2022-02-07 22:02:29 +00:00
Edd Robinson 38a889ecf6 refactor: remove unnecessary struct 2022-02-07 22:02:29 +00:00
Marco Neumann d9cc9f5a2a
feat: expose write buffer connection config via CLI (#3651)
* feat: improve rskafka config error messages

* feat: expose write buffer connection config via CLI
2022-02-07 16:24:28 +00:00
Marco Neumann 977ccc1989
fix: use a single metric registry for ingester (#3652)
With this change write buffer ingestion metrics are showing up under
`/metrics`

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-02-07 15:56:54 +00:00
Edd Robinson 87ac926e06
feat: add queries system table (#3655)
Co-authored-by: Andrew Lamb <andrew@nerdnetworks.org>
2022-02-07 15:26:06 +00:00
Carol (Nichols || Goulding) 2e30483f1f
refactor: Remove predicate module from predicate crate (#3648)
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-02-07 14:54:07 +00:00
Marco Neumann e2db1df11f
refactor: improve writer buffer consumer interface (#3631)
* refactor: improve writer buffer consumer interface

The change looks huge but is actually rather simple. To
understand the interface change, let me first explain what we want:

- be able to fetch watermarks for any sequencer
- have streams:
  - each streams tracks a sequencer and has an offset state (no read
    multiplexing)
  - we can seek a stream
  - seeking and streaming cannot be done at the same time (that would be
    weird and likely leads to many bugs both in write buffer and in the
    user code)
- ideally we don't need to create streams of all sequencers but can
  choose a subset

Before this change we had one mutable consumer struct where you can get
all streams and watermark functions (this mutable-borrows the consumer)
or you can seek a single stream (this also mutable-borrows the
consumer). This is a bit weird for multiple reasons:

- you cannot seek a single stream without dropping all of them
- the mutable-borrow construct makes it really difficult to pass the
  streams into separate threads
- the consumer is boxed (because its mutable) which makes it more
  difficult to handle in a large-scale application

What this change does is the following:

- you have an immutable consumer (similar to the producer)
- the consumer offers the following methods:
  - get the set of sequencer IDs
  - get watermark for any sequencer
  - get a stream handler (see next point) for any sequencer
- the stream handler captures the stream state (offset) and provides you
  a standard `Stream<_>` interface as well as a seek function.
  Mutable-borrows ensure that you cannot use both at the same time.

The stream handler provides you the stream via `handler.stream()`. It
doesn't implement `Stream<_>` itself because the way boxing, dynamic
dispatch work, and pinning interact (i.e. I couldn't get it to work
without the indirection).

As a bonus point (which we don't use however) you can now create
multiple streams for the same sequencer and they all have their own
offset.

* fix: review comments

Co-authored-by: Carol (Nichols || Goulding) <193874+carols10cents@users.noreply.github.com>

Co-authored-by: Carol (Nichols || Goulding) <193874+carols10cents@users.noreply.github.com>
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-02-07 12:24:17 +00:00
Edd Robinson a52c0a26e6 feat: print read filter results 2022-02-04 22:14:22 +00:00
Edd Robinson d328b37803 feat: teach IOx to convert RPC frames into Recordbatches 2022-02-04 18:34:54 +00:00
Edd Robinson 4cdaaf96bf refactor: clean up errors 2022-02-04 18:34:54 +00:00
Edd Robinson ea0ece8b4b feat: issue read_filter request 2022-02-04 18:34:54 +00:00
Dom Dwyer 0b044b95fb perf: use sharded namespace cache
Enables the ShardedCache for the namespace schema cache.
2022-02-04 16:12:51 +00:00
Dom Dwyer 026a557c0b refactor: rename TableNamespaceSharder
Rename to JumpHash and expose the hashing internals for reuse (outside
of only table & namespace sharding).
2022-02-04 15:56:09 +00:00
Dom Dwyer 0fd122e365 refactor: "inf" retention const
Adds the iox_catalog::INFINITE_RETENTION_POLICY constant.
2022-02-04 15:35:33 +00:00
Dom Dwyer f1ba50f40b feat: resolve query pool ID at startup
This commit adds a --query-pool flag to router2, used to upsert a
catalog record at startup. Auto-created namespaces will reference this
query pool.

This is for testing only and will be removed in a future commit.
2022-02-04 15:35:30 +00:00
Dom Dwyer aefc70a9ea feat(router2): namespace auto-creation
Decorate the existing request handler pipeline with a layer that
implicitly creates the namespace when a write request is received.
2022-02-04 15:34:15 +00:00
Marco Neumann 0c01044677
fix: partition range in ingester CLI has INCLUSIVE end (#3641) 2022-02-04 13:41:57 +00:00
Marco Neumann d2ccf23263
fix: use standard DSN argument for router2 CLI (#3632)
- support long-form (instead of relying on positional arguments)
- use same code as everying else

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-02-03 17:20:52 +00:00