Commit Graph

490 Commits (27a98d75860072be935166c3d617cbef479813de)

Author SHA1 Message Date
wiedld e29b453e0d
refactor: move PartitionsSourceConfig into local scheduler (#8026) 2023-06-20 16:05:59 -07:00
wiedld 34b5fadde0
refactor: move scheduler related configs to compactor_scheduler (#8013) 2023-06-20 09:55:35 -07:00
wiedld 8b7ef69f6f
refactor: move partitions_source to scheduler (#8010)
* refactor: make compactor_scheduler crate

* refactor: move PartitionsSource into the compactor_scheduler

    The compactor currently uses PartitionsSource in two ways:
       * for the preparation of PartitionIds prior to the compactor pipeline.
       * for the abstraction which utilize the PartitionIds during the IO pipeline.
    This commit is a refactoring to enable us to delineate between these two utilizations.
    The former (preparation) utilization will now be done in the compactor_scheduler.
    Since the compactor is dependent on the compactor_scheduler, it made sense to move the trait to the scheduler.
2023-06-16 10:02:13 -07:00
wiedld 7a1f54ac64
refactor: remove compactor type (#8011)
* refactor: remove cold compactions
* refactor: remove compaction_type
2023-06-16 09:40:13 -07:00
Joe-Blount a21596f604
chore: add L1/L2 accumulated size test (#8012)
This adds 4 small test cases intending to test how compaction decisions made affect the final size of L1/L2 files.
The assumption is that when a steady stream of small L0 files is arriving, the compactor needs to be rewriting L1s so they grow to a reasonable size instead of getting left small.
2023-06-16 13:28:59 +00:00
Joe-Blount 5d0bb68c5b
chore: add compactor option to disable scratchpad (#7995) 2023-06-15 14:35:55 +00:00
Phil Bracikowski e34ec77e8d
feat(garbage-collector): batch parquet existence checks to catalog (#7964)
* feat(garbage-collector): batch parquet existence checks to catalog

The core feature of this PR is batching the existence checks of parquet
files in object store against the catalog. Before, there was 1 catalog
query per each parquet file in object store. This can be a lot of
requests.

This PR can perform one query of at most 100 parquet file uuids against
the catalog in one query. A hundred seems like a decent starting place.

The batch may not reach 100 because there is also a timeout on receiving
object store meta objects from the object store lister thread. That
timeout is set to 100 milliseconds. If more than 100 are received, they
are batched into 100 for the catalog.

Additionally, this PR includes surrounding code changes to make it more
idiomatic (but not perfect). It follows up some suggested work from
 #7652 for watching for shutdown on the threads.

* fixes #7784

* use hashset instead of vec to test for contains
* chore: add test for db failure path
* remove ParquetFileExistsByOSID and other single field structs that are
  just for sql deserialization; map to uuid explicitly
* fix the sqlite query by using a blob literal X'<hex>' for uuids
* comment clarifications
* adjust loggings to warn from debug for expected rare events

Many thanks to Carol for help implementing this!
2023-06-14 07:59:00 -07:00
Joe-Blount 59fd5cd7b4 chore: retain written files in shadow mode 2023-06-09 13:22:49 -05:00
Joe-Blount 9171e1521f fix: clean compaction output from scratchpad 2023-06-08 09:35:33 -05:00
Carol (Nichols || Goulding) bf699a8b60
fix: Remove partition ID from the metadata serialized into Parquet files (#7947)
Nothing gets the partition ID out of the metadata. The parts of the code
interacting with object storage that need the ID to create the object
store path were using the partition ID from the metadata out of
convenience, but I changed those places to pass in the partition ID in a
separate argument instead.

This will make the transition to deterministic partition IDs a bit
smoother.

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2023-06-08 14:03:21 +00:00
Andrew Lamb 17c0d837b3
chore: Update DataFusion, arrow, object_store pins (#7942)
* chore: Update DataFusion, arrow, object_store pins

* chore: Update for hakari

* chore: Update for new APIs

* fix: update test

---------

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2023-06-07 17:08:31 +00:00
Marco Neumann fa5011197c
refactor: migrate `iox_query` to use DataFusion statistics (#7908)
This is the major part of #7470. Additional clean ups (e.g. to remove
the actual types from `data_types`) will follow.

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2023-06-02 09:18:59 +00:00
Andrew Lamb a48f681e56
feat(parquet): reduce and limit buffering when writing parquet files (#7880)
* feat: limit buffering when writing parquet files ("combined solution")

* chore: Run cargo hakari tasks

---------

Co-authored-by: Raphael Taylor-Davies <r.taylordavies@googlemail.com>
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2023-05-31 13:27:32 +00:00
Joe-Blount 3b77929007 chore: lint fmt 2023-05-30 16:08:40 -05:00
Joe-Blount c2423d8a5c feat: Order L0s more deterministically 2023-05-30 15:52:03 -05:00
Andrew Lamb 1ff76b7bf2 chore: use workspace dependencies for `object_store` 2023-05-26 07:03:42 -04:00
Carol (Nichols || Goulding) 9c0faa66f0
feat: Set a table partition template explicitly or from the namespace
And use the table partition template when partitioning writes to that
table.
2023-05-24 10:34:30 -04:00
Carol (Nichols || Goulding) afb3838437
feat: Optionally supply the namespace partition template when creating a namespace 2023-05-24 10:10:34 -04:00
Marco Neumann 103e814f22
refactor: clean up catalog `parquet_files` interface (#7853)
* feat: `ParquetFileRepo::list_all`

* refactor: remove `ParquetFileRepo::list_by_table`

* refactor: simlify `ParquetFileRepo::list_by_table`

* refactor: remove `ParquetFileRepo::count`

* refactor: remove `ParquetFileRepo::update_compaction_level`

* refactor: remove `ParquetFileRepo::exists`

* fix: test

---------

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2023-05-24 09:15:03 +00:00
Dom Dwyer 928a4d163e
build: remove unused dependencies from crates
This commit fixes loads of crates (47!) had unused dependencies, or
mis-configured dependencies (test deps as normal deps).

I added the "unused_crate_dependencies" to all crates to help prevent
this mess from growing again!

    https://doc.rust-lang.org/beta/nightly-rustc/rustc_lint_defs/builtin/static.UNUSED_CRATE_DEPENDENCIES.html

This has the minor downside of false-positives when specifying
dev-dependencies for test/bench binaries - these are files in /test or
/benches (not normal tests). This commit includes a workaround,
importing them in lib.rs (gated by a feature flag). I think the
trade-off of better dependency management is worth it!
2023-05-23 14:55:43 +02:00
Andrew Lamb 6344fe8c3f
chore: Add rationale for `clippy::future_not_send` (#7822)
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2023-05-18 16:58:56 +00:00
Jeffrey Smith II a9ee1bae6c chore: Merge remote-tracking branch 'origin/main' into smith/remove-transactions-main 2023-05-09 13:26:02 -05:00
Carol (Nichols || Goulding) e8655af52d
fix: Change ColumnsByName::new to enable taking ownership if caller wants to give it 2023-05-09 14:55:00 +02:00
Carol (Nichols || Goulding) cc41216382
fix: Undo the addition of a TableInfo type; store partition_template on TableSchema 2023-05-09 14:54:59 +02:00
Carol (Nichols || Goulding) 596673d515
refactor: Create a new ColumnsByName type to abstract over TableSchema columns
And allow usage of just the columns when that's all that's needed
without leaking the BTreeMap implementation detail everywhere
2023-05-09 14:54:58 +02:00
Carol (Nichols || Goulding) 1f1dcc947d
fix: Don't change how the compactor gets the table schema 2023-05-09 14:54:58 +02:00
Carol (Nichols || Goulding) 58d9c40ffd
feat: If namespace or table partition templates are specified, use those 2023-05-09 14:54:57 +02:00
Carol (Nichols || Goulding) 9229ce5668
fix: Rename compactor2_test_utils to compactor_test_utils 2023-05-09 11:02:11 +02:00
Carol (Nichols || Goulding) dd9c5d1b13
fix: Rename compactor2 to compactor 2023-05-09 10:58:55 +02:00
Carol (Nichols || Goulding) a5769a461b
fix: Remove old compactor and ioxd_compactor 2023-04-06 16:49:52 -04:00
Marco Neumann 5f43f2a719
refactor: remove old query planning code (#7449)
Closes #7406.

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2023-04-06 16:05:08 +00:00
dependabot[bot] 66982f988b
chore(deps): Bump object_store from 0.5.5 to 0.5.6 (#7433)
Bumps [object_store](https://github.com/apache/arrow-rs) from 0.5.5 to 0.5.6.
- [Release notes](https://github.com/apache/arrow-rs/releases)
- [Changelog](https://github.com/apache/arrow-rs/blob/master/CHANGELOG-old.md)
- [Commits](https://github.com/apache/arrow-rs/commits)

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2023-04-04 08:43:34 +00:00
dependabot[bot] 4eedb7ea77
chore(deps): Bump async-trait from 0.1.66 to 0.1.68 (#7374)
* chore(deps): Bump async-trait from 0.1.66 to 0.1.68

Bumps [async-trait](https://github.com/dtolnay/async-trait) from 0.1.66 to 0.1.68.
- [Release notes](https://github.com/dtolnay/async-trait/releases)
- [Commits](https://github.com/dtolnay/async-trait/compare/0.1.66...0.1.68)

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* chore: Run cargo hakari tasks

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2023-03-30 10:14:36 +00:00
dependabot[bot] 9cbcdc7672
chore(deps): Bump tokio from 1.26.0 to 1.27.0 (#7373)
Bumps [tokio](https://github.com/tokio-rs/tokio) from 1.26.0 to 1.27.0.
- [Release notes](https://github.com/tokio-rs/tokio/releases)
- [Commits](https://github.com/tokio-rs/tokio/compare/tokio-1.26.0...tokio-1.27.0)

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2023-03-30 09:36:04 +00:00
dependabot[bot] 8f3a9396d0
chore(deps): Bump async-trait from 0.1.64 to 0.1.66 (#7129)
Bumps [async-trait](https://github.com/dtolnay/async-trait) from 0.1.64 to 0.1.66.
- [Release notes](https://github.com/dtolnay/async-trait/releases)
- [Commits](https://github.com/dtolnay/async-trait/compare/0.1.64...0.1.66)

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2023-03-06 10:13:29 +00:00
dependabot[bot] 3256fcc72e
chore(deps): Bump object_store from 0.5.4 to 0.5.5
Bumps [object_store](https://github.com/apache/arrow-rs) from 0.5.4 to 0.5.5.
- [Release notes](https://github.com/apache/arrow-rs/releases)
- [Changelog](https://github.com/apache/arrow-rs/blob/master/CHANGELOG-old.md)
- [Commits](https://github.com/apache/arrow-rs/compare/object_store_0.5.4...object_store_0.5.5)

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2023-03-03 02:00:51 +00:00
dependabot[bot] c538cac4ef
chore(deps): Bump tokio from 1.25.0 to 1.26.0 (#7107)
* chore(deps): Bump tokio from 1.25.0 to 1.26.0

Bumps [tokio](https://github.com/tokio-rs/tokio) from 1.25.0 to 1.26.0.
- [Release notes](https://github.com/tokio-rs/tokio/releases)
- [Commits](https://github.com/tokio-rs/tokio/compare/tokio-1.25.0...tokio-1.26.0)

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* chore: Run cargo hakari tasks

---------

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2023-03-02 09:50:39 +00:00
Carol (Nichols || Goulding) faae5eb438 chore: Rerun cargo hakari manage-deps 2023-02-27 11:56:15 +01:00
Marco Neumann 08578cded5
refactor: n_threads and n_target_partitions are non-zero (#7047)
* refactor: n_threads and n_target_partitions are non-zero

Zero values will just panic. Prevent that earlier.

* fix: typo

Co-authored-by: Carol (Nichols || Goulding) <193874+carols10cents@users.noreply.github.com>

---------

Co-authored-by: Carol (Nichols || Goulding) <193874+carols10cents@users.noreply.github.com>
2023-02-23 16:57:00 +00:00
Dom Dwyer 2d46a364dc
feat: namespace soft-delete support
This commit adds initial support for "soft" namespace deletion, where
the actual records & data remain, but are no longer queryable /
writeable.

Soft deletion is eventually consistent - users can expect to continue
writing to and reading from a bucket after issuing a soft delete call,
until the various components either restart, or have their caches
flushed.

The components treat soft-deleted namespaces differently:

    * router: ignore soft deleted namespaces
    * ingester: accept soft deleted namespaces
    * compactor: accept soft deleted namespaces
    * querier: ignore soft deleted namespaces
    * various gRPC services: ignore soft deleted namespaces

This ensures that the ingester & compactor do not see rows "vanishing"
from the database, and continue to make forward progress.

Writes for the deleted namespace that are buffered in the ingester will
be persisted as normal, allowing us to support "un-delete" operations
where the system is restored to a the state at which the delete was
issued (rather than loosing the buffered data).

Follow-on work is required to ensure GC drops the orphaned parquet files
after the configured GC time, and optimisations such as not compacting
parquet from soft-deleted namespaces seems like a trivial win.
2023-02-13 12:01:35 +01:00
dependabot[bot] 0cbd9f6a82
chore(deps): Bump tokio-util from 0.7.5 to 0.7.7 (#6964)
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2023-02-13 10:10:53 +00:00
Andrew Lamb 779fb93ce7
refactor: move test builders out of compactor2 code (#6953)
* refactor: move test builders out of compactor2 code

* fix: docs
2023-02-10 18:28:09 +00:00
dependabot[bot] c0c9b51b9e
chore(deps): Bump tokio-util from 0.7.4 to 0.7.5 (#6941)
Bumps [tokio-util](https://github.com/tokio-rs/tokio) from 0.7.4 to 0.7.5.
- [Release notes](https://github.com/tokio-rs/tokio/releases)
- [Commits](https://github.com/tokio-rs/tokio/compare/tokio-util-0.7.4...tokio-util-0.7.5)

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2023-02-10 09:42:00 +00:00
dependabot[bot] 0ecde75af5
chore(deps): Bump object_store from 0.5.3 to 0.5.4 (#6900)
Bumps [object_store](https://github.com/apache/arrow-rs) from 0.5.3 to 0.5.4.
- [Release notes](https://github.com/apache/arrow-rs/releases)
- [Changelog](https://github.com/apache/arrow-rs/blob/master/CHANGELOG-old.md)
- [Commits](https://github.com/apache/arrow-rs/compare/object_store_0.5.3...object_store_0.5.4)

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2023-02-08 09:40:11 +00:00
Raphael Taylor-Davies d3601a59f8
chore: update DataFusion, upgrade `arrow` `arrow-flight` and `parquet` to `32.0.0` (#6756)
* chore: update DataFusion

* fix: test

* chore: format

* chore: clippy

* chore: update arrow

* chore: arrow upgrade fallout

* chore: Run cargo hakari tasks

* chore: remove failing warm compaction test

* fix: flight error propagation

* chore: update parquet size

* fix: Update error message

* chore: Update parquet metadata test

---------

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2023-02-06 11:35:39 +00:00
Carol (Nichols || Goulding) 30fea67701
fix: Move variables within format strings. Thanks clippy!
Changes made automatically using `cargo clippy --fix`.
2023-02-03 13:06:17 -05:00
dependabot[bot] d0e6b16450
chore(deps): Bump bytes from 1.3.0 to 1.4.0
Bumps [bytes](https://github.com/tokio-rs/bytes) from 1.3.0 to 1.4.0.
- [Release notes](https://github.com/tokio-rs/bytes/releases)
- [Changelog](https://github.com/tokio-rs/bytes/blob/master/CHANGELOG.md)
- [Commits](https://github.com/tokio-rs/bytes/compare/v1.3.0...v1.4.0)

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2023-02-01 00:30:56 +00:00
dependabot[bot] 6f032b1d57
chore(deps): Bump async-trait from 0.1.63 to 0.1.64 (#6769)
Bumps [async-trait](https://github.com/dtolnay/async-trait) from 0.1.63 to 0.1.64.
- [Release notes](https://github.com/dtolnay/async-trait/releases)
- [Commits](https://github.com/dtolnay/async-trait/compare/0.1.63...0.1.64)

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2023-01-31 10:18:27 +00:00
dependabot[bot] ed7d02a225
chore(deps): Bump tokio from 1.24.2 to 1.25.0
Bumps [tokio](https://github.com/tokio-rs/tokio) from 1.24.2 to 1.25.0.
- [Release notes](https://github.com/tokio-rs/tokio/releases)
- [Commits](https://github.com/tokio-rs/tokio/commits/tokio-1.25.0)

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2023-01-30 01:57:27 +00:00
Andrew Lamb ead6812210
fix: reduce logging verbosity (#6704)
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2023-01-27 13:53:42 +00:00