Commit Graph

369 Commits (1dacf567d95c8d5ea27f9488c085408037a4504e)

Author SHA1 Message Date
Carol (Nichols || Goulding) ecd06c6ec3
fix: ParquetFileRepo create should be responsible for setting INITIAL_COMPACTION_LEVEL
When created in the catalog, parquet files should always have compaction
level 0. Updating the compaction level should always happen in the
compactor.

Only the catalog should need to know about the initial compaction level
value.
2022-03-10 13:51:18 -05:00
Carol (Nichols || Goulding) ff31407dce
refactor: Extract a ParquetFileParams type for create
This has the advantages of:

- Not needing to create fake parquet file IDs or fake deleted_at
  values that aren't used by create before insertion
- Not needing too many arguments for create
- Naming the arguments so it's easier to see what value is what
  argument, especially in tests
- Easier to reuse arguments or parts of arguments by using copies of
  params, which makes it easier to see differences, especially in tests
2022-03-10 13:51:18 -05:00
Paul Dix 27999ff72f
feat: add compaction_level and created_at to parquet_file (#3972) 2022-03-10 15:56:57 +00:00
Andrew Lamb 2c3d30ca32
chore: Update datafusion, arrow, flight and parquet (#4000)
* chore: Update datafusion, arrow, flight and parquet

* fix: api change

* fix: fmt

* fix: update test metadata size

* fix: Update sizes in parquet test

* fix: more metadata size update
2022-03-10 12:24:47 +00:00
Nga Tran c6cab3538f
refactor: move parquet chunk's new and decode to parquet_file crate (#3987) 2022-03-08 22:04:32 +00:00
Andrew Lamb e09f39d6a0
chore: Update datafusion (#3943)
* chore: Update datafusion

* refactor: update for new datafusion

* chore: Run cargo hakari tasks

Co-authored-by: CircleCI[bot] <circleci@influxdata.com>
2022-03-04 19:37:46 +00:00
Andrew Lamb 677a272095
refactor: Clean up some future clippy warnings from nightly (#3892)
* refactor: clean up new clippy lints

* refactor: complete other cleanups

* fix: ignore overzealous clippy

* fix: re-remove old code
2022-03-03 19:14:27 +00:00
Carol (Nichols || Goulding) 8f3e44bf76
refactor: Extract a crate for shared data types in the new design 2022-03-02 12:16:15 -05:00
Marco Neumann 33851be3a5
chore: upgrade Rust to 1.59 (#3875)
Mostly a few new clippy crates around `flat_map`, `and_then`, and
"underscore locks" (!!!):
https://rust-lang.github.io/rust-clippy/master/index.html#let_underscore_lock

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-02-28 15:14:19 +00:00
Raphael Taylor-Davies 2a842fbb1a
feat: correctly sort data and store in catalog metadata (#3864)
* feat: respect sort order in ChunkTableProvider (#3214)

feat: persist sort order in catalog (#3845)

refactor: owned SortKey (#3845)

* fix: size tests

* refactor: immutable SortKey

* test: test sort order restart (#3845)

* chore: explicit None for sort key

* chore: test cleanup

* fix: handling of sort keys containing fields

* chore: remove unused selected_sort_key

* chore: more docs

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-02-25 17:56:27 +00:00
Marco Neumann f966f4c7a4
feat: create `ParquetChunk` in querier (#3857)
Adds a small adapter that is able to produce `ParquetChunk`s for NG.

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-02-25 08:54:16 +00:00
Marco Neumann 49d1be30e7
feat: wire up `ParquetFilePath` for NG (#3853)
It's a bit of a duck-type hack, but if we wanna just `ParquetFileChunk`
in the new architecture, we somehow need it to accept new-gen paths.
Also path handling should be somewhat centralized since
ingester/compactor/querier all need to construct them. So having a
`ParquetFilePath` that supports both path styles seems to be a
not-to-bad solution. This should obviously be cleaned up in some
not-to-distant future.
2022-02-24 16:05:38 +00:00
Carol (Nichols || Goulding) 252ced7adf
feat: Add row count to the parquet_file record in the catalog (#3847)
Fixes #3842.
2022-02-24 15:20:50 +00:00
Marco Neumann d62a052394
feat: extend catalog so we can recover `ParquetChunk`s from it (#3852)
* refactor: less parquet data copying

* feat: `PartitionRepo::get_by_id`

* feat: `TableRepo::get_by_id`

* feat: `ParquetFile::file_size_bytes`

* feat: `ParquetFile::parquet_metadata`

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-02-24 13:16:15 +00:00
dependabot[bot] b63f920d4c
chore(deps): Bump parquet from 9.0.2 to 9.1.0 (#3828)
* chore(deps): Bump parquet from 9.0.2 to 9.1.0

Bumps [parquet](https://github.com/apache/arrow-rs) from 9.0.2 to 9.1.0.
- [Release notes](https://github.com/apache/arrow-rs/releases)
- [Changelog](https://github.com/apache/arrow-rs/blob/master/CHANGELOG.md)
- [Commits](https://github.com/apache/arrow-rs/compare/9.0.2...9.1.0)

---
updated-dependencies:
- dependency-name: parquet
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>

* chore: update chunk size test

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Raphael Taylor-Davies <r.taylordavies@googlemail.com>
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-02-23 11:25:15 +00:00
dependabot[bot] 3b7d31c88a
chore(deps): Bump arrow from 9.0.2 to 9.1.0 (#3826)
Bumps [arrow](https://github.com/apache/arrow-rs) from 9.0.2 to 9.1.0.
- [Release notes](https://github.com/apache/arrow-rs/releases)
- [Changelog](https://github.com/apache/arrow-rs/blob/master/CHANGELOG.md)
- [Commits](https://github.com/apache/arrow-rs/compare/9.0.2...9.1.0)

---
updated-dependencies:
- dependency-name: arrow
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2022-02-23 09:25:46 +00:00
dependabot[bot] ad3868ed7c
chore(deps): Bump tokio from 1.16.1 to 1.17.0 (#3814)
* chore(deps): Bump tokio from 1.16.1 to 1.17.0

Bumps [tokio](https://github.com/tokio-rs/tokio) from 1.16.1 to 1.17.0.
- [Release notes](https://github.com/tokio-rs/tokio/releases)
- [Commits](https://github.com/tokio-rs/tokio/compare/tokio-1.16.1...tokio-1.17.0)

---
updated-dependencies:
- dependency-name: tokio
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>

* build: update workspace-hack

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Dom Dwyer <dom@itsallbroken.com>
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-02-22 16:27:43 +00:00
Andrew Lamb a30803e692
chore: Update datafusion, update `arrow`/`parquet`/`arrow-flight` to 9.0 (#3733)
* chore: Update datafusion

* chore: Update arrow

* fix: missing updates

* chore: Update cargo.lock

* fix: update for smaller parquet size

* fix: update test for smaller parquet files

* test: ensure parquet_file tests write multiple row groups

* fix: update callsite

* fix: Update for tests

* fix: harkari

* fix: use IoxObjectStore::existing

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-02-15 12:10:24 +00:00
Carol (Nichols || Goulding) 73828323ac
feat: Ingester Flight gRPC API (#3623)
* feat: Add a way to run ingester with an in-memory catalog from the CLI

If you set the --catalog-dsn string to "mem", rather than using that as
a Postgres connection URL, create an in-memory catalog.

Planning on using this in tests, so not documenting.

* fix: Set default topic to the same value as SHARED_KAFKA_TOPIC

Namely, both should use an underscore. I don't think there's a way to
directly share these values between a constant and an annotation.

* feat: Add a flight API (handshake only) to ingester

* fix: Create partitions if using file-based write buffer

* fix: Change the server fixture to handle ingester server type

For now, the ingester doesn't implement the deployment API. Not sure if
it should or not.

* feat: Start implementing ingester do_get, namely decoding the query

Skip serialization of the predicate for the moment.

* refactor: Rename ingest protos to ingester to match crate name

* refactor: Rename QueryResults to QueryData

* feat: Move ingester flight client to new querier crate

* fix: Off by one error, different starting indexes in sequencers

* fix: Create new CLI argument to pick the catalog type

* fix: Create a CLI option to set the number of topics to auto-create in the write buffer

* fix: Check the arrow flight service's health to tell that the ingester gRPC is up

* fix: Set postgres as the default catalog type

* fix: Return an error rather than panicking if CLI args aren't right
2022-02-09 19:07:44 +00:00
Carol (Nichols || Goulding) 2e30483f1f
refactor: Remove predicate module from predicate crate (#3648)
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-02-07 14:54:07 +00:00
Nga Tran 17fbeaaade
feat: insert the persisted info into the catalog in one transaction (#3636)
* feat: add ProcessedTombstoneRepo

* feat: add function add_parquet_file_with_tombstones

* fix: remove unecessary use

* feat: handling transaction when adding parquet file and its processed tombstones

* feat: tests update catalog for parquet file and processed tombstones

* fix: make add parquet file & its processed tombstones fully transactional

* chore: cleanup

* test: add integration tests for new catalog update functions

* chore: remove catalog_update.rs

* chore: cleanup

* fix: assert the right values

* fix: create unique namespace

* fix: support non transaction create_many

* test: remove tests that do not work in a transaction

* fix: one more case with unique namespace

* chore: more verification around for better understanding why certain tests fail

* fix: compare difference rather than absolute becasue the DB already has data

* fix: fix the argument provided to SQL

* fix: return non-empty processed tombstones

* fix: insert the right parquet file

* chore: remove unsed file

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-02-07 14:44:15 +00:00
Carol (Nichols || Goulding) 62a2ad289b
feat: Implement deserializing IoxMetadata from protobuf (#3589)
Fixes #3587.

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-02-02 16:05:21 +00:00
Marco Neumann 22778a3a80
chore: upgrade rskafka and parking_lot (#3592) 2022-02-01 11:50:42 +00:00
Carol (Nichols || Goulding) 093d5acfd4
fix: Unify temporary multiple definitions of IoxMetadata 2022-01-31 10:48:29 -05:00
Carol (Nichols || Goulding) 8f81ce5501
refactor: Share parquet_file::storage code between new and old metadata 2022-01-31 10:36:33 -05:00
Carol (Nichols || Goulding) bf89162fa5
refactor: Move IoxMetadata to parquet_file 2022-01-31 10:36:33 -05:00
Carol (Nichols || Goulding) 0f72a881ef
refactor: Rename Rust struct parquet_file::IoxMetadata to be IoxMetadataOld 2022-01-31 10:36:33 -05:00
Carol (Nichols || Goulding) 1b298bb5bd
refactor: Alias the old proto definitions to make clearer the new ones coming in 2022-01-31 10:36:33 -05:00
Dom 32d7c4cbfe
refactor: remove InfluxColumnType::IOx (#3565)
* refactor: remove InfluxColumnType::IOx

Remove unused column variant - see #3554 for context.

* refactor: reserve SEMANTIC_TYPE_IOX name in proto

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-01-27 21:15:36 +00:00
Andrew Lamb 5488c257d1
chore: Update datafusion, upgrade to arrow/parqet/arrow-flight 8.0.0 (#3517)
* chore: Update datafusion

* chore: update to arrow 8

* fix: update to use new DataFusion APIs

* fix: update case for sortedness

* fix: cargo hakari
2022-01-27 13:33:27 +00:00
Andrew Lamb dd23056efd
chore: update datafusion, arrow, prost, tonic, pbjson, etc (#3455)
* chore: update datafusion, arrow, prost, tonic, etc

* fix: update pprof as well

* chore: update hakari

* fix: update pbjson

* chore: update heappy

* fix: hakari

* fix: workaround https://github.com/influxdata/influxdb_iox/issues/3458

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-01-13 17:07:15 +00:00
Andrew Lamb cdf5c21cd4
fix: Fix max timestamp value comparison in chunk metadata (#3453)
* fix: Fix max timestamp value comparison in chunk metadata

* refactor: rename contains to overlaps

Co-authored-by: Edd Robinson <me@edd.io>
2022-01-13 16:58:30 +00:00
Raphael Taylor-Davies c5cf03511c
fix: parquet column count statistics (#2124) (#3444)
* fix: parquet metadata total_count (#2124)

* chore: review feedback

Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2022-01-11 21:56:24 +00:00
Marco Neumann f3f6f335a9
chore: upgrade to snafu 0.7 (#3440) 2022-01-11 19:22:36 +00:00
Marco Neumann 37bb7f2120 chore: `cargo update`
dependabot currently doesn't work due to
https://github.com/dependabot/dependabot-core/issues/4574

Excluded `quote` due to
https://github.com/dtolnay/quote/issues/204
2022-01-11 14:57:51 +01:00
Nga Tran ec8644a39a refactor: return clearer error message 2021-12-07 12:24:28 -05:00
Nga Tran 561c5ed8e7 refactor: make checking no data happen during reading inout stream 2021-12-07 12:03:41 -05:00
Nga Tran c992c82582 chore: Merge branch 'main' into ntran/compact_os_tests 2021-12-07 11:08:12 -05:00
Raphael Taylor-Davies 5fdaa5b4ab
chore: don't panic with invalid parquet (#3309)
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2021-12-06 21:15:35 +00:00
Carol (Nichols || Goulding) 7499eac067
fix: Disable uuid serde feature; we're not actually serializing any UUIDs
Connects to #3117.
2021-12-06 09:37:31 -05:00
Carol (Nichols || Goulding) 02c297e850
fix: Always specify the parking_lot feature of tokio to get potential perf boost 2021-12-06 09:37:15 -05:00
Carol (Nichols || Goulding) 0b24b3c227
fix: Use a consistent version specifier when depending on the futures crate 2021-12-06 09:37:12 -05:00
Raphael Taylor-Davies bca561366b
feat: don't copy parquet files out of disk object store (#3282) (#3293)
Co-authored-by: kodiakhq[bot] <49736102+kodiakhq[bot]@users.noreply.github.com>
2021-12-05 16:31:40 +00:00
Raphael Taylor-Davies 11067bfe3f
feat: simplify parquet reader (#3282) (#3291)
* feat: simplify parquet reader (#3282)

* chore: add back log line
2021-12-03 23:21:58 +00:00
Nga Tran 86f9fe0bcb refactor: no longer need to create and test no-row-groups parquet files 2021-12-03 15:14:04 -05:00
Nga Tran 152281e428 fix: Capture the right 'no data' while parquet has no data 2021-12-03 12:19:48 -05:00
kodiakhq[bot] 2857b6a990
Merge branch 'main' into er/feat/load_chunk_cli 2021-12-02 20:20:56 +00:00
Edd Robinson b4ea9887ba refactor: error name 2021-12-02 20:14:02 +00:00
Carol (Nichols || Goulding) 5d0fd1c603
fix: Allow dead code on fields that are now detected as never read 2021-12-02 11:52:01 -05:00
Edd Robinson 88aedc556e feat: add FromStr implementation 2021-12-02 12:59:52 +00:00