Commit Graph

114 Commits (db/wait-timeout-utility)

Author SHA1 Message Date
davidby-influx ec412f793b
fix: do not rename files on mmap failure (#23396)
If NewTSMReader() fails because mmap fails, do not
rename the file, because the error is probably
caused by vm.max_map_count being too low

closes https://github.com/influxdata/influxdb/issues/23172
2022-06-07 08:37:00 -07:00
Daniel Moran 3eb4fdaf33
fix(tsm1): fix data race when accessing tombstone stats (#20903) 2021-03-09 15:20:40 -05:00
Ayan George 3436db4ebb
refactor: Use binary.Read() instead of io.ReadFull() (#19323)
The original version of verifyVersion() reads into a byte slice,
manually ensures its byte order, then converts it to a type comparable
with Version and MagicNumber.

This patch hides those details by calling binary.Read() and reading
values into properly typed variables.

This adds a bit of overhead but this code isn't in the hot-path and this
patch greatly simplifies the code.

verifyVersion() originally accepted an io.ReadSeeker.  It is only called
in once place and that function immediately calls seek after
verifyVersion(), therefore it is probably safe to call Seek() BEFORE
verifyVersion().

The benefit is that verifyVersion() is easier to test since we can pass
it a bytes.Buffer.

This patch adds a test for verifyVersion() as well as a benchmark.

benchmark                    old ns/op     new ns/op     delta
BenchmarkVerifyVersion-8     73.5          123           +67.35%

Finally, this commit moves verifyVersion() from writer.go to reader.go
which is where it is actually used.
2020-08-13 14:54:18 -04:00
tmgordeeva f1d26652e9
fix(storage): skip TSM files with block read errors (#15885)
* fix(storage): skip TSM files with block read errors

When we find a bad TSM file during compaction, propagate the error up and move
the bad file aside. The engine will disregard the file so the next compaction
will not hit the same error.
2019-12-13 15:05:39 -08:00
Edd Robinson 05e7def600
Merge pull request #10332 from ludweeg/ludweeg/unslice
Simplify s[:] to s where s is a slice
2019-02-11 10:24:43 +00:00
Ben Wells e9bada090f Fix misspelling identified by misspell 2019-02-03 20:27:43 +00:00
ludweeg 5622355526 Simplify s[:] to s where s is a slice 2018-10-04 17:10:21 +03:00
Edd Robinson 996bb9bfa6 Wire in mmap advise hint to TSMReader 2018-08-03 16:27:39 +01:00
Stuart Carnie 910d0fe5e6 feat(tsm1): ArrayCursor interfaces and implementations
Array cursors are enabled for storage RPC calls

tsm1:

* Implemented cursors that utilize Array decoders

storage:

* Abstractions to easily switch to Array cursors
2018-07-16 08:55:37 -07:00
Stuart Carnie 790639d728 feat(tsm1): Add Read<Type>ArrayBlock APIs to TSMReader and mmapAccessor 2018-07-16 08:55:37 -07:00
Jeff Wendling e6aec771b0 fix(tsdb): attempt to work on docker on windows
multiple users have attempted to run influxdb in a docker container
with a windows host and a volume mounted from windows. that causes
problems because it apparently uses samba/cifs which does not
support fsync on directories. this patchset will, if it receives an EINVAL
on directory fsync, as is what appears to happen on samba/cifs, then it
will ignore it. this should help.

fixes #9833.
fixes #9630.
2018-06-01 14:57:18 -06:00
Jeff Wendling 2b3cd8406f
Merge pull request #9892 from influxdata/jmw-tombstone-notifications
tsdb: observe tombstone files as well
2018-05-24 09:56:09 -06:00
Stuart Carnie e3d7095d14 fix(tsm1): Avoid searching index if key outside index bounds
This improvement avoids performing a binary search on the index by
first checking the key against the lower and upper bounds. Particularly
useful for multiple, fully-compacted TSM files.
2018-05-23 13:29:49 -07:00
Jeff Wendling ce565965a4 tsdb: avoid nil checks on the observer
this avoids nil panics in the case that someone eventually forgets.
2018-05-23 13:15:41 -06:00
Jeff Wendling 8ad515b387 tsdb: remove the shard id again
callers can always ensure that the observer set on the engine options
is appropriate for that shard id. this simplifies the api and reduces
the chance of bugs due to mixing up shard ids.
2018-05-23 13:04:54 -06:00
Jeff Wendling 15ae0bd98d tsdb: observe tombstone files as well 2018-05-22 22:07:16 -06:00
Jacob Marble 7de2dcd3d9 TSM: TSMReader.Close blocks until reads complete 2018-04-30 13:46:03 -07:00
Ben Johnson 2a8ca9a10e
Revert "Use MADV_WILLNEED when loading TSM files"
This reverts commit ee270e1dd2.
2018-03-21 13:26:45 -06:00
Jason Wilder ee270e1dd2 Use MADV_WILLNEED when loading TSM files
When the TSM index is large, this hints to the kernel to start
faulting in pages to avoid lots of smaller page faults.
2018-01-31 12:38:16 -07:00
Edd Robinson 42c3adeffc simplify packages under tsdb 2018-01-21 09:41:27 -08:00
Jason Wilder 80cd5e63af Optimize DeleteSeriesRange
This removes more allocations and speeds up some critical sections.
2017-11-13 09:02:10 -07:00
Jason Wilder 000768371f Optimized deletes in TSM index
This optimizes how deletes are processed to reduce memory usage
and improve efficiency.
2017-11-13 09:02:08 -07:00
Jason Wilder eebd88f825 Don't write tombstones for keys that do not exist
This filters out keys that do not exist in a TSM file to avoid
writing entries that would end up being ignored when applied.
2017-11-13 08:50:07 -07:00
Jason Wilder cb658774bb Reduce allocations when reading tombstone v4 2017-11-13 08:50:07 -07:00
Jason Wilder 2959b8d2eb Make BatchDeleters concurrent 2017-11-13 08:50:07 -07:00
Jason Wilder 6b19d2b673 Add BatchDeleters type 2017-11-13 08:48:03 -07:00
Jason Wilder 9ac83601cf Use BatchDeleter in FileStore 2017-11-13 08:48:03 -07:00
Jason Wilder 4ed19348fd Add a BatchDelete capability to TSMReader 2017-11-13 08:48:03 -07:00
Jason Wilder 17bae05370 Allow buffering tombstones before writing to disk 2017-11-13 08:48:03 -07:00
Jason Wilder cbbbe8bedb Delete series in batches
This fixes a regression where deleting series keys would happen
one at a time instead of in bulk.
2017-10-24 11:06:21 -06:00
Jason Wilder 05131f4453 Fix indirectIndex not removing fully deleted series
If multiple tombstones exists for a series that ended up causing the
full data to be deleted, the blocks were not removed from the offsets
in the index.  This causes the TSMReader to report that a key exist
but does not have any data.

During a compaction, every key should have at least one value.  Since
this invariant was broken, the compaction aborted early and ends up
dropping all series keys that are lexigraphically greater than where
the breakage occured.  This would cause data to be dropped during the
compaction.
2017-10-18 18:16:41 -06:00
Jason Wilder 9f102adabe Abort BlockIterator iteration if deletes detected
This fixes a potential bug where the BlockIterator would skip blocks
if the underlying TSMReader had deletes on it concurrently.  This
could possibly occur due to changes in 91eb9de3 that now use the
existing TSMReaders from the FileStore instead of creating new ones
during compaction.
2017-10-18 18:16:37 -06:00
Jason Wilder 4d171f3f40 Fix data deleted outside of time range 2017-10-18 13:39:47 -06:00
Stuart Carnie a0848eac8c remove unnecessary err value
readKey never sets error, so it is always nil
2017-10-12 08:28:53 -07:00
Jason Wilder 3af9c7df37 Remove a defer allocation
Shows up under high cardinality compactions.
2017-10-03 10:48:14 -06:00
Stuart Carnie 92756ec0ad Reduce allocations, improve readEntries performance by simplifying loop
* callers of ReadEntries and Key API can cache allocated slice
2017-09-19 11:57:10 -07:00
Jason Wilder 31646aae3a Release mmap pages when shard is cold
This instructs the kernel that it can release memory used by mmap'd
TSM files when they are not actively being used.  It the mappings are
use, the kernel will fault the pages back in.  On linux, this causes
RES memory to drop immediately when run.
2017-09-18 11:51:51 -06:00
Jason Wilder 7d467c2047 Fix windows unmapping of anonymous index slice 2017-09-12 10:30:10 -06:00
Jason Wilder 26f92ce6ac Remove commented out code 2017-09-11 15:30:05 -06:00
Jason Wilder 4ed9c75896 Fix unmapping anonymous memory slice 2017-09-11 15:29:26 -06:00
Jason Wilder d3e832b462 Use offheap memory for indirect index offsets slice 2017-09-11 15:29:25 -06:00
Jason Wilder 778000435a Conver all keys from string to []byte in TSM engine
This switches all the interfaces that take string series key to
take a []byte.  This eliminates many small allocations where we
convert between to two repeatedly.  Eventually, this change should
propogate futher up the stack.
2017-07-28 11:00:50 -06:00
Stuart Carnie eec80692c4 Taught tsm1 storage engine how to read and write uint64 values
* introduced UnsignedValue type
  * leveraged existing int64 compression algorithms (RLE, Simple 8B)
* tsm and WAL can read and write UnsignedValue
* compaction is aware of UnsignedValue
* unsigned support to model, cursors and write points

NOTE: there is no support to create unsigned points, as the line
protocol has not been modified.
2017-07-24 09:03:22 -07:00
Jason Wilder 5e11cdcdd7 Fix incorrect condition in OverlapsKeyRange
The min key was not used in OverlapsKeyRange which caused it to return
false when it should be true.  This causes a bug where deletes would not
write tombstones for files that actually contained the data it was supposed
to delete.
2017-07-07 12:19:33 -06:00
Jason Wilder 29c2b1958e Fix deletes triggering unnecessary compactions
Tombstone files would be written to all TSM files even if the deleted
keys or timerange did not exist in the TSM file.  This had the side
effect of causing shards to get recompacted back to the same state. If
any shards or large numbers of TSM files existed, disk usage and CPU
utilization would spike causing issues.

This prevents tombstones being written for TSM files that could not
possiby contain the series keys being deleted or if the delted time
range is outside the range of the file.
2017-05-08 14:52:28 -06:00
Jason Wilder f87fd7c7ed Stop background compaction goroutines when shard is cold
Each shard has a number of goroutines for compacting different levels
of TSM files.  When a shard goes cold and is fully compacted, these
goroutines are still running.

This change will stop background shard goroutines when the shard goes
cold and start them back up if new writes arrive.
2017-05-03 16:31:57 -06:00
Jason Wilder 1bc4936336 Export Reader.ReadBytes 2017-04-28 13:20:55 -06:00
Jason Wilder 5fa8073fc2 Merge branch '1.2' into jw-merge-123 2017-04-04 11:12:06 -06:00
Jason Wilder 32c4d43952 Speed up drop measurement
This reworks drop measurement to use a sorted list of series keys
instead of creating an intermediate map.  It remove allocations
and some extra garbage that is created during drop measurement.
2017-04-03 08:57:53 -06:00
Jason Wilder 6232d5e56d Remove defer allocations in TSMReader 2017-04-03 08:57:52 -06:00